Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
Tm6sf1P58749 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.76■■■□□ 2.83
Tm6sf1P58749 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Tm6sf1P58749 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Tm6sf1P58749 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Tm6sf1P58749 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Tm6sf1P58749 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Tm6sf1P58749 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Tm6sf1P58749 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Tm6sf1P58749 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Tm6sf1P58749 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Tm6sf1P58749 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Tm6sf1P58749 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.63■■■□□ 2.81
Tm6sf1P58749 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
Tm6sf1P58749 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Tm6sf1P58749 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Tm6sf1P58749 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Tm6sf1P58749 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Tm6sf1P58749 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
Tm6sf1P58749 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Tm6sf1P58749 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.8
Tm6sf1P58749 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Tm6sf1P58749 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
Tm6sf1P58749 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Tm6sf1P58749 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Tm6sf1P58749 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.47■■■□□ 2.79
Tm6sf1P58749 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.46■■■□□ 2.79
Tm6sf1P58749 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Tm6sf1P58749 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Tm6sf1P58749 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.43■■■□□ 2.78
Tm6sf1P58749 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Tm6sf1P58749 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
Tm6sf1P58749 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Tm6sf1P58749 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Tm6sf1P58749 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Tm6sf1P58749 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
Tm6sf1P58749 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Tm6sf1P58749 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Tm6sf1P58749 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Tm6sf1P58749 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Tm6sf1P58749 Peli2-204ENSMUST00000226513 1320 ntBASIC32.29■■■□□ 2.76
Tm6sf1P58749 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Tm6sf1P58749 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
Tm6sf1P58749 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Tm6sf1P58749 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
Tm6sf1P58749 Gm24804-201ENSMUST00000174982 85 ntBASIC32.26■■■□□ 2.75
Tm6sf1P58749 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Tm6sf1P58749 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.21■■■□□ 2.75
Tm6sf1P58749 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.19■■■□□ 2.74
Tm6sf1P58749 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Tm6sf1P58749 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Tm6sf1P58749 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Tm6sf1P58749 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
Tm6sf1P58749 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Tm6sf1P58749 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Tm6sf1P58749 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Tm6sf1P58749 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
Tm6sf1P58749 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Tm6sf1P58749 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Tm6sf1P58749 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC32.04■■■□□ 2.72
Tm6sf1P58749 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Tm6sf1P58749 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Tm6sf1P58749 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Tm6sf1P58749 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
Tm6sf1P58749 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.99■■■□□ 2.71
Tm6sf1P58749 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
Tm6sf1P58749 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.99■■■□□ 2.71
Tm6sf1P58749 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Tm6sf1P58749 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Tm6sf1P58749 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.98■■■□□ 2.71
Tm6sf1P58749 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.98■■■□□ 2.71
Tm6sf1P58749 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
Tm6sf1P58749 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Tm6sf1P58749 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.95■■■□□ 2.71
Tm6sf1P58749 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Tm6sf1P58749 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.94■■■□□ 2.7
Tm6sf1P58749 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Tm6sf1P58749 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Tm6sf1P58749 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Tm6sf1P58749 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
Tm6sf1P58749 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Tm6sf1P58749 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Tm6sf1P58749 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Tm6sf1P58749 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Tm6sf1P58749 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Tm6sf1P58749 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Tm6sf1P58749 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Tm6sf1P58749 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Tm6sf1P58749 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Tm6sf1P58749 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
Tm6sf1P58749 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Tm6sf1P58749 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Tm6sf1P58749 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Tm6sf1P58749 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Tm6sf1P58749 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.85■■■□□ 2.69
Tm6sf1P58749 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.85■■■□□ 2.69
Tm6sf1P58749 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Tm6sf1P58749 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.83■■■□□ 2.69
Tm6sf1P58749 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Tm6sf1P58749 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms