Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.16■■■□□ 2.58
Mmp20P57748 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.13■■■□□ 2.57
Mmp20P57748 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.13■■■□□ 2.57
Mmp20P57748 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
Mmp20P57748 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.11■■■□□ 2.57
Mmp20P57748 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Mmp20P57748 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
Mmp20P57748 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Mmp20P57748 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Mmp20P57748 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Mmp20P57748 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Mmp20P57748 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Mmp20P57748 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Mmp20P57748 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Mmp20P57748 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.98■■■□□ 2.55
Mmp20P57748 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.95■■■□□ 2.55
Mmp20P57748 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.94■■■□□ 2.54
Mmp20P57748 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Mmp20P57748 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Mmp20P57748 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Mmp20P57748 Gm45855-201ENSMUST00000212546 880 ntBASIC30.91■■■□□ 2.54
Mmp20P57748 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
Mmp20P57748 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Mmp20P57748 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Mmp20P57748 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
Mmp20P57748 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Mmp20P57748 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Mmp20P57748 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Mmp20P57748 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Mmp20P57748 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Mmp20P57748 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Mmp20P57748 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Mmp20P57748 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.74■■■□□ 2.51
Mmp20P57748 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Mmp20P57748 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Mmp20P57748 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.7■■■□□ 2.51
Mmp20P57748 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Mmp20P57748 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.68■■■□□ 2.5
Mmp20P57748 Gm9397-201ENSMUST00000200125 605 ntBASIC30.68■■■□□ 2.5
Mmp20P57748 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Mmp20P57748 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Mmp20P57748 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Mmp20P57748 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Mmp20P57748 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Mmp20P57748 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Mmp20P57748 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.59■■■□□ 2.49
Mmp20P57748 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.58■■■□□ 2.49
Mmp20P57748 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Mmp20P57748 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.57■■■□□ 2.48
Mmp20P57748 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Mmp20P57748 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Mmp20P57748 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Mmp20P57748 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.53■■■□□ 2.48
Mmp20P57748 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Mmp20P57748 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Mmp20P57748 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.48
Mmp20P57748 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Mmp20P57748 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
Mmp20P57748 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Mmp20P57748 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Mmp20P57748 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Mmp20P57748 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.47■■■□□ 2.47
Mmp20P57748 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.46■■■□□ 2.47
Mmp20P57748 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Mmp20P57748 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Mmp20P57748 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Mmp20P57748 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Mmp20P57748 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Mmp20P57748 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Mmp20P57748 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.41■■■□□ 2.46
Mmp20P57748 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.4■■■□□ 2.46
Mmp20P57748 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.37■■■□□ 2.45
Mmp20P57748 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Mmp20P57748 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Mmp20P57748 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Mmp20P57748 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Mmp20P57748 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Mmp20P57748 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
Mmp20P57748 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Mmp20P57748 Gm24970-201ENSMUST00000175582 82 ntBASIC30.27■■■□□ 2.44
Mmp20P57748 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
Mmp20P57748 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.26■■■□□ 2.43
Mmp20P57748 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.26■■■□□ 2.43
Mmp20P57748 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Mmp20P57748 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Mmp20P57748 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
Mmp20P57748 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Mmp20P57748 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.2■■■□□ 2.43
Mmp20P57748 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Mmp20P57748 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Mmp20P57748 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Mmp20P57748 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
Mmp20P57748 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Mmp20P57748 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.17■■■□□ 2.42
Mmp20P57748 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Mmp20P57748 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
Mmp20P57748 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Mmp20P57748 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Mmp20P57748 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Mmp20P57748 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms