Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab4aP56371 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rab4aP56371 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rab4aP56371 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab4aP56371 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab4aP56371 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rab4aP56371 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab4aP56371 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab4aP56371 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab4aP56371 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rab4aP56371 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rab4aP56371 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab4aP56371 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rab4aP56371 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rab4aP56371 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab4aP56371 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab4aP56371 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab4aP56371 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab4aP56371 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rab4aP56371 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab4aP56371 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Rab4aP56371 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab4aP56371 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rab4aP56371 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rab4aP56371 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.19■□□□□ 0.82
Rab4aP56371 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab4aP56371 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab4aP56371 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab4aP56371 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab4aP56371 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab4aP56371 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab4aP56371 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab4aP56371 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rab4aP56371 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab4aP56371 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab4aP56371 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rab4aP56371 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab4aP56371 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rab4aP56371 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Rab4aP56371 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.08■□□□□ 0.81
Rab4aP56371 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab4aP56371 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab4aP56371 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab4aP56371 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rab4aP56371 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab4aP56371 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab4aP56371 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rab4aP56371 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab4aP56371 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab4aP56371 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab4aP56371 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab4aP56371 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab4aP56371 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Rab4aP56371 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.02■□□□□ 0.8
Rab4aP56371 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab4aP56371 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rab4aP56371 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab4aP56371 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab4aP56371 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rab4aP56371 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Rab4aP56371 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab4aP56371 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rab4aP56371 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.98■□□□□ 0.79
Rab4aP56371 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rab4aP56371 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rab4aP56371 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rab4aP56371 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab4aP56371 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rab4aP56371 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab4aP56371 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab4aP56371 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.95■□□□□ 0.78
Rab4aP56371 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab4aP56371 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rab4aP56371 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab4aP56371 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Rab4aP56371 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab4aP56371 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rab4aP56371 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab4aP56371 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rab4aP56371 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rab4aP56371 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab4aP56371 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab4aP56371 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab4aP56371 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab4aP56371 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rab4aP56371 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rab4aP56371 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.87■□□□□ 0.77
Rab4aP56371 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rab4aP56371 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rab4aP56371 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rab4aP56371 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab4aP56371 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rab4aP56371 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.84■□□□□ 0.77
Rab4aP56371 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rab4aP56371 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.83■□□□□ 0.76
Rab4aP56371 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Rab4aP56371 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rab4aP56371 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rab4aP56371 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.8■□□□□ 0.76
Rab4aP56371 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms