Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Tnfrsf1aP25118 Gm27322-201ENSMUST00000184007 104 ntBASIC21.67■■□□□ 1.06
Tnfrsf1aP25118 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.66■■□□□ 1.06
Tnfrsf1aP25118 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.66■■□□□ 1.06
Tnfrsf1aP25118 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Tnfrsf1aP25118 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf1aP25118 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf1aP25118 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf1aP25118 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf1aP25118 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf1aP25118 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf1aP25118 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf1aP25118 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Tnfrsf1aP25118 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnfrsf1aP25118 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
Tnfrsf1aP25118 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.56■■□□□ 1.04
Tnfrsf1aP25118 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.56■■□□□ 1.04
Tnfrsf1aP25118 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf1aP25118 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.55■■□□□ 1.04
Tnfrsf1aP25118 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf1aP25118 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf1aP25118 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf1aP25118 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Tnfrsf1aP25118 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf1aP25118 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf1aP25118 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Tnfrsf1aP25118 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.46■■□□□ 1.03
Tnfrsf1aP25118 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf1aP25118 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf1aP25118 Gm26115-201ENSMUST00000175605 87 ntBASIC21.44■■□□□ 1.02
Tnfrsf1aP25118 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Tnfrsf1aP25118 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf1aP25118 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf1aP25118 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf1aP25118 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf1aP25118 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf1aP25118 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf1aP25118 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf1aP25118 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.4■■□□□ 1.02
Tnfrsf1aP25118 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
Tnfrsf1aP25118 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf1aP25118 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf1aP25118 Gm8109-201ENSMUST00000194076 746 ntBASIC21.37■■□□□ 1.01
Tnfrsf1aP25118 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf1aP25118 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf1aP25118 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf1aP25118 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf1aP25118 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.34■■□□□ 1.01
Tnfrsf1aP25118 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf1aP25118 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf1aP25118 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Tnfrsf1aP25118 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.32■■□□□ 1
Tnfrsf1aP25118 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnfrsf1aP25118 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tnfrsf1aP25118 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tnfrsf1aP25118 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf1aP25118 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf1aP25118 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Tnfrsf1aP25118 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf1aP25118 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.27■■□□□ 1
Tnfrsf1aP25118 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tnfrsf1aP25118 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tnfrsf1aP25118 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf1aP25118 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf1aP25118 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf1aP25118 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Tnfrsf1aP25118 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf1aP25118 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf1aP25118 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf1aP25118 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf1aP25118 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf1aP25118 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf1aP25118 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf1aP25118 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnfrsf1aP25118 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnfrsf1aP25118 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf1aP25118 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf1aP25118 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf1aP25118 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf1aP25118 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf1aP25118 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf1aP25118 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf1aP25118 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf1aP25118 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Tnfrsf1aP25118 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.13■□□□□ 0.97
Tnfrsf1aP25118 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf1aP25118 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf1aP25118 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf1aP25118 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Tnfrsf1aP25118 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf1aP25118 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Tnfrsf1aP25118 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf1aP25118 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf1aP25118 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf1aP25118 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.07■□□□□ 0.96
Tnfrsf1aP25118 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Tnfrsf1aP25118 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf1aP25118 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf1aP25118 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
Tnfrsf1aP25118 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms