Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fn1P11276 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fn1P11276 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fn1P11276 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Fn1P11276 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.54■■□□□ 1.04
Fn1P11276 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Fn1P11276 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fn1P11276 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fn1P11276 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fn1P11276 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.49■■□□□ 1.03
Fn1P11276 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.47■■□□□ 1.03
Fn1P11276 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Fn1P11276 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Fn1P11276 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.47■■□□□ 1.03
Fn1P11276 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.46■■□□□ 1.03
Fn1P11276 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Fn1P11276 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.44■■□□□ 1.02
Fn1P11276 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Fn1P11276 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Fn1P11276 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Fn1P11276 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Fn1P11276 Gm8503-201ENSMUST00000118131 455 ntBASIC21.4■■□□□ 1.02
Fn1P11276 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Fn1P11276 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Fn1P11276 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Fn1P11276 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Fn1P11276 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.38■■□□□ 1.01
Fn1P11276 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.37■■□□□ 1.01
Fn1P11276 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Fn1P11276 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.33■■□□□ 1.01
Fn1P11276 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.3■■□□□ 1
Fn1P11276 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.3■■□□□ 1
Fn1P11276 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fn1P11276 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.28■■□□□ 1
Fn1P11276 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Fn1P11276 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fn1P11276 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fn1P11276 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.22■□□□□ 0.99
Fn1P11276 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fn1P11276 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.2■□□□□ 0.98
Fn1P11276 Gm24970-201ENSMUST00000175582 82 ntBASIC21.19■□□□□ 0.98
Fn1P11276 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.19■□□□□ 0.98
Fn1P11276 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fn1P11276 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Fn1P11276 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Fn1P11276 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Fn1P11276 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Fn1P11276 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Fn1P11276 Gm6821-201ENSMUST00000107540 542 ntBASIC21.14■□□□□ 0.98
Fn1P11276 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Fn1P11276 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.12■□□□□ 0.97
Fn1P11276 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Fn1P11276 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.12■□□□□ 0.97
Fn1P11276 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Fn1P11276 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Fn1P11276 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Fn1P11276 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Fn1P11276 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.05■□□□□ 0.96
Fn1P11276 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fn1P11276 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fn1P11276 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.01■□□□□ 0.95
Fn1P11276 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Fn1P11276 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Fn1P11276 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fn1P11276 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Fn1P11276 Gm15039-201ENSMUST00000118914 875 ntBASIC20.98■□□□□ 0.95
Fn1P11276 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fn1P11276 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fn1P11276 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.93■□□□□ 0.94
Fn1P11276 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Fn1P11276 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fn1P11276 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Fn1P11276 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fn1P11276 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.84■□□□□ 0.93
Fn1P11276 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.84■□□□□ 0.93
Fn1P11276 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Fn1P11276 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Fn1P11276 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Fn1P11276 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.82■□□□□ 0.92
Fn1P11276 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fn1P11276 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Fn1P11276 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Fn1P11276 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fn1P11276 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fn1P11276 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Fn1P11276 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.78■□□□□ 0.92
Fn1P11276 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Fn1P11276 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Fn1P11276 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.76■□□□□ 0.91
Fn1P11276 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Fn1P11276 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Fn1P11276 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fn1P11276 Mipep-204ENSMUST00000225043 1548 ntBASIC20.74■□□□□ 0.91
Fn1P11276 Mir6538-201ENSMUST00000183713 110 ntBASIC20.74■□□□□ 0.91
Fn1P11276 Gm7432-201ENSMUST00000210343 879 ntBASIC20.73■□□□□ 0.91
Fn1P11276 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.73■□□□□ 0.91
Fn1P11276 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.73■□□□□ 0.91
Fn1P11276 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fn1P11276 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Fn1P11276 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms