Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ercc1P07903 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ercc1P07903 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ercc1P07903 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ercc1P07903 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ercc1P07903 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ercc1P07903 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ercc1P07903 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ercc1P07903 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ercc1P07903 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ercc1P07903 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ercc1P07903 Rab21-202ENSMUST00000218831 843 ntBASIC21.45■■□□□ 1.02
Ercc1P07903 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ercc1P07903 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Ercc1P07903 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ercc1P07903 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ercc1P07903 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ercc1P07903 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Ercc1P07903 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ercc1P07903 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ercc1P07903 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ercc1P07903 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.37■■□□□ 1.01
Ercc1P07903 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc1P07903 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.34■■□□□ 1.01
Ercc1P07903 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ercc1P07903 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc1P07903 Zxda-201ENSMUST00000117281 2621 ntBASIC21.32■■□□□ 1
Ercc1P07903 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ercc1P07903 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ercc1P07903 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ercc1P07903 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.31■■□□□ 1
Ercc1P07903 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ercc1P07903 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ercc1P07903 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ercc1P07903 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.3■■□□□ 1
Ercc1P07903 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ercc1P07903 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ercc1P07903 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ercc1P07903 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ercc1P07903 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ercc1P07903 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ercc1P07903 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ercc1P07903 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ercc1P07903 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ercc1P07903 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ercc1P07903 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ercc1P07903 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.22■□□□□ 0.99
Ercc1P07903 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ercc1P07903 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ercc1P07903 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ercc1P07903 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ercc1P07903 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ercc1P07903 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ercc1P07903 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ercc1P07903 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.19■□□□□ 0.98
Ercc1P07903 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ercc1P07903 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ercc1P07903 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ercc1P07903 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.19■□□□□ 0.98
Ercc1P07903 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ercc1P07903 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ercc1P07903 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ercc1P07903 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ercc1P07903 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ercc1P07903 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ercc1P07903 Gm25262-201ENSMUST00000174934 133 ntBASIC21.15■□□□□ 0.98
Ercc1P07903 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ercc1P07903 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ercc1P07903 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ercc1P07903 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ercc1P07903 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ercc1P07903 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.12■□□□□ 0.97
Ercc1P07903 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ercc1P07903 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ercc1P07903 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ercc1P07903 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ercc1P07903 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ercc1P07903 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ercc1P07903 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ercc1P07903 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ercc1P07903 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
Ercc1P07903 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc1P07903 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc1P07903 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc1P07903 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc1P07903 Mipep-204ENSMUST00000225043 1548 ntBASIC21.07■□□□□ 0.96
Ercc1P07903 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ercc1P07903 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ercc1P07903 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc1P07903 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ercc1P07903 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc1P07903 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc1P07903 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc1P07903 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
Ercc1P07903 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ercc1P07903 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ercc1P07903 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ercc1P07903 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ercc1P07903 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ercc1P07903 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms