Protein–RNA interactions for Protein: P06327

Gm5629, Ig heavy chain V region VH558 A1/A4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5629P06327 Zxda-201ENSMUST00000117281 2621 ntBASIC18.68■□□□□ 0.58
Gm5629P06327 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.66■□□□□ 0.58
Gm5629P06327 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm5629P06327 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm5629P06327 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Gm5629P06327 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm5629P06327 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm5629P06327 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm5629P06327 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm5629P06327 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm5629P06327 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm5629P06327 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Gm5629P06327 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.57■□□□□ 0.56
Gm5629P06327 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5629P06327 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gm5629P06327 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm5629P06327 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5629P06327 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5629P06327 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5629P06327 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5629P06327 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5629P06327 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm5629P06327 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.51■□□□□ 0.55
Gm5629P06327 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm5629P06327 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm5629P06327 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm5629P06327 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gm5629P06327 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm5629P06327 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm5629P06327 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm5629P06327 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm5629P06327 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Gm5629P06327 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm5629P06327 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm5629P06327 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm5629P06327 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm5629P06327 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm5629P06327 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm5629P06327 Mipep-204ENSMUST00000225043 1548 ntBASIC18.45■□□□□ 0.54
Gm5629P06327 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm5629P06327 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Gm5629P06327 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Gm5629P06327 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm5629P06327 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.42■□□□□ 0.54
Gm5629P06327 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Gm5629P06327 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5629P06327 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5629P06327 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5629P06327 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
Gm5629P06327 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5629P06327 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.39■□□□□ 0.53
Gm5629P06327 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5629P06327 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5629P06327 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5629P06327 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5629P06327 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.37■□□□□ 0.53
Gm5629P06327 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Gm5629P06327 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5629P06327 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5629P06327 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm5629P06327 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5629P06327 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5629P06327 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Gm5629P06327 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5629P06327 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5629P06327 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5629P06327 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5629P06327 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5629P06327 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5629P06327 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5629P06327 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gm5629P06327 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5629P06327 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5629P06327 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5629P06327 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5629P06327 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5629P06327 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gm5629P06327 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5629P06327 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm5629P06327 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Gm5629P06327 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5629P06327 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5629P06327 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5629P06327 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5629P06327 Amer2-203ENSMUST00000225247 2662 ntBASIC18.21■□□□□ 0.51
Gm5629P06327 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5629P06327 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5629P06327 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Gm5629P06327 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm5629P06327 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5629P06327 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm5629P06327 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Gm5629P06327 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm5629P06327 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Gm5629P06327 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5629P06327 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5629P06327 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5629P06327 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5629P06327 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5629P06327 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms