Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
H3f3cP02301 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
H3f3cP02301 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
H3f3cP02301 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.22■■□□□ 1.15
H3f3cP02301 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.2■■□□□ 1.14
H3f3cP02301 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
H3f3cP02301 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
H3f3cP02301 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
H3f3cP02301 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
H3f3cP02301 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
H3f3cP02301 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
H3f3cP02301 Gm24804-201ENSMUST00000174982 85 ntBASIC22.15■■□□□ 1.14
H3f3cP02301 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
H3f3cP02301 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
H3f3cP02301 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
H3f3cP02301 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
H3f3cP02301 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
H3f3cP02301 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.12■■□□□ 1.13
H3f3cP02301 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
H3f3cP02301 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
H3f3cP02301 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
H3f3cP02301 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
H3f3cP02301 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.09■■□□□ 1.13
H3f3cP02301 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
H3f3cP02301 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.09■■□□□ 1.13
H3f3cP02301 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
H3f3cP02301 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
H3f3cP02301 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
H3f3cP02301 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
H3f3cP02301 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
H3f3cP02301 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
H3f3cP02301 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
H3f3cP02301 Peli2-204ENSMUST00000226513 1320 ntBASIC22.02■■□□□ 1.12
H3f3cP02301 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
H3f3cP02301 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
H3f3cP02301 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
H3f3cP02301 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
H3f3cP02301 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.98■■□□□ 1.11
H3f3cP02301 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
H3f3cP02301 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
H3f3cP02301 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.97■■□□□ 1.11
H3f3cP02301 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
H3f3cP02301 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.96■■□□□ 1.11
H3f3cP02301 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
H3f3cP02301 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
H3f3cP02301 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
H3f3cP02301 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
H3f3cP02301 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
H3f3cP02301 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.92■■□□□ 1.1
H3f3cP02301 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
H3f3cP02301 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
H3f3cP02301 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
H3f3cP02301 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
H3f3cP02301 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
H3f3cP02301 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.89■■□□□ 1.09
H3f3cP02301 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H3f3cP02301 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
H3f3cP02301 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H3f3cP02301 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.87■■□□□ 1.09
H3f3cP02301 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
H3f3cP02301 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
H3f3cP02301 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
H3f3cP02301 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H3f3cP02301 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H3f3cP02301 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H3f3cP02301 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
H3f3cP02301 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H3f3cP02301 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.78■■□□□ 1.08
H3f3cP02301 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
H3f3cP02301 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
H3f3cP02301 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H3f3cP02301 Gm16148-201ENSMUST00000119653 893 ntBASIC21.74■■□□□ 1.07
H3f3cP02301 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H3f3cP02301 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
H3f3cP02301 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H3f3cP02301 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
H3f3cP02301 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
H3f3cP02301 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.72■■□□□ 1.07
H3f3cP02301 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
H3f3cP02301 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H3f3cP02301 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H3f3cP02301 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H3f3cP02301 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H3f3cP02301 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
H3f3cP02301 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
H3f3cP02301 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
H3f3cP02301 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.67■■□□□ 1.06
H3f3cP02301 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.67■■□□□ 1.06
H3f3cP02301 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
H3f3cP02301 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
H3f3cP02301 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
H3f3cP02301 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H3f3cP02301 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
H3f3cP02301 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
H3f3cP02301 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
H3f3cP02301 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H3f3cP02301 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H3f3cP02301 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H3f3cP02301 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
H3f3cP02301 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms