Protein–RNA interactions for Protein: O88952

Lin7c, Protein lin-7 homolog C, mousemouse

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin7cO88952 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lin7cO88952 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lin7cO88952 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lin7cO88952 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lin7cO88952 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lin7cO88952 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lin7cO88952 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lin7cO88952 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lin7cO88952 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lin7cO88952 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lin7cO88952 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.46■■□□□ 1.03
Lin7cO88952 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.45■■□□□ 1.03
Lin7cO88952 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lin7cO88952 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lin7cO88952 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Lin7cO88952 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Lin7cO88952 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lin7cO88952 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Lin7cO88952 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lin7cO88952 Gm8109-201ENSMUST00000194076 746 ntBASIC21.4■■□□□ 1.02
Lin7cO88952 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lin7cO88952 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lin7cO88952 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lin7cO88952 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lin7cO88952 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Lin7cO88952 Gm27322-201ENSMUST00000184007 104 ntBASIC21.38■■□□□ 1.01
Lin7cO88952 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Lin7cO88952 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lin7cO88952 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lin7cO88952 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lin7cO88952 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lin7cO88952 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin7cO88952 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Lin7cO88952 Mipep-204ENSMUST00000225043 1548 ntBASIC21.34■■□□□ 1.01
Lin7cO88952 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.33■■□□□ 1.01
Lin7cO88952 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Lin7cO88952 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lin7cO88952 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.31■■□□□ 1
Lin7cO88952 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Lin7cO88952 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lin7cO88952 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lin7cO88952 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin7cO88952 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin7cO88952 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lin7cO88952 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.24■□□□□ 0.99
Lin7cO88952 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lin7cO88952 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lin7cO88952 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.22■□□□□ 0.99
Lin7cO88952 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lin7cO88952 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lin7cO88952 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lin7cO88952 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lin7cO88952 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lin7cO88952 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lin7cO88952 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.18■□□□□ 0.98
Lin7cO88952 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.18■□□□□ 0.98
Lin7cO88952 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lin7cO88952 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lin7cO88952 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lin7cO88952 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.14■□□□□ 0.97
Lin7cO88952 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lin7cO88952 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.13■□□□□ 0.97
Lin7cO88952 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lin7cO88952 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Lin7cO88952 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lin7cO88952 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lin7cO88952 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Lin7cO88952 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lin7cO88952 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lin7cO88952 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lin7cO88952 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lin7cO88952 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lin7cO88952 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Lin7cO88952 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Lin7cO88952 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lin7cO88952 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Lin7cO88952 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Lin7cO88952 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lin7cO88952 Zxda-201ENSMUST00000117281 2621 ntBASIC21.05■□□□□ 0.96
Lin7cO88952 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Lin7cO88952 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lin7cO88952 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.04■□□□□ 0.96
Lin7cO88952 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lin7cO88952 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Lin7cO88952 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lin7cO88952 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lin7cO88952 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lin7cO88952 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Lin7cO88952 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lin7cO88952 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lin7cO88952 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lin7cO88952 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.94■□□□□ 0.94
Lin7cO88952 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lin7cO88952 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lin7cO88952 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Lin7cO88952 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.93■□□□□ 0.94
Lin7cO88952 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lin7cO88952 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
Lin7cO88952 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lin7cO88952 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 1046.8 ms