Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cldn1O88551 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.57■■□□□ 1.2
Cldn1O88551 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cldn1O88551 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cldn1O88551 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cldn1O88551 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Cldn1O88551 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cldn1O88551 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cldn1O88551 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cldn1O88551 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cldn1O88551 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cldn1O88551 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cldn1O88551 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
Cldn1O88551 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.43■■□□□ 1.18
Cldn1O88551 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cldn1O88551 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cldn1O88551 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cldn1O88551 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Cldn1O88551 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.4■■□□□ 1.18
Cldn1O88551 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cldn1O88551 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.4■■□□□ 1.18
Cldn1O88551 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Cldn1O88551 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.39■■□□□ 1.17
Cldn1O88551 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cldn1O88551 Gm9397-201ENSMUST00000200125 605 ntBASIC22.36■■□□□ 1.17
Cldn1O88551 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cldn1O88551 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cldn1O88551 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cldn1O88551 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cldn1O88551 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.33■■□□□ 1.17
Cldn1O88551 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.32■■□□□ 1.16
Cldn1O88551 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cldn1O88551 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cldn1O88551 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Cldn1O88551 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cldn1O88551 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Cldn1O88551 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.3■■□□□ 1.16
Cldn1O88551 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cldn1O88551 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cldn1O88551 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.29■■□□□ 1.16
Cldn1O88551 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cldn1O88551 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cldn1O88551 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Cldn1O88551 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cldn1O88551 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cldn1O88551 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cldn1O88551 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Cldn1O88551 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.24■■□□□ 1.15
Cldn1O88551 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cldn1O88551 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cldn1O88551 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cldn1O88551 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cldn1O88551 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cldn1O88551 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.21■■□□□ 1.15
Cldn1O88551 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Cldn1O88551 Mipep-204ENSMUST00000225043 1548 ntBASIC22.21■■□□□ 1.15
Cldn1O88551 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cldn1O88551 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.2■■□□□ 1.14
Cldn1O88551 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.19■■□□□ 1.14
Cldn1O88551 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cldn1O88551 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cldn1O88551 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cldn1O88551 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.14■■□□□ 1.13
Cldn1O88551 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cldn1O88551 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cldn1O88551 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.12■■□□□ 1.13
Cldn1O88551 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.12■■□□□ 1.13
Cldn1O88551 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cldn1O88551 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Cldn1O88551 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.1■■□□□ 1.13
Cldn1O88551 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.09■■□□□ 1.13
Cldn1O88551 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cldn1O88551 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Cldn1O88551 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cldn1O88551 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Cldn1O88551 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cldn1O88551 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cldn1O88551 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cldn1O88551 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.98■■□□□ 1.11
Cldn1O88551 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cldn1O88551 Gm24970-201ENSMUST00000175582 82 ntBASIC21.97■■□□□ 1.11
Cldn1O88551 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cldn1O88551 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.96■■□□□ 1.11
Cldn1O88551 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.96■■□□□ 1.11
Cldn1O88551 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.95■■□□□ 1.1
Cldn1O88551 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Cldn1O88551 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cldn1O88551 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cldn1O88551 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Cldn1O88551 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cldn1O88551 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.9■■□□□ 1.1
Cldn1O88551 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cldn1O88551 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cldn1O88551 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cldn1O88551 Gm8503-201ENSMUST00000118131 455 ntBASIC21.87■■□□□ 1.09
Cldn1O88551 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.84■■□□□ 1.09
Cldn1O88551 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cldn1O88551 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cldn1O88551 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cldn1O88551 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms