Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Sigmar1O55242 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Sigmar1O55242 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sigmar1O55242 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sigmar1O55242 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sigmar1O55242 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sigmar1O55242 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sigmar1O55242 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sigmar1O55242 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sigmar1O55242 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Sigmar1O55242 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sigmar1O55242 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sigmar1O55242 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sigmar1O55242 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sigmar1O55242 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sigmar1O55242 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sigmar1O55242 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sigmar1O55242 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sigmar1O55242 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sigmar1O55242 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sigmar1O55242 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sigmar1O55242 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sigmar1O55242 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sigmar1O55242 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sigmar1O55242 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sigmar1O55242 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sigmar1O55242 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sigmar1O55242 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sigmar1O55242 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sigmar1O55242 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sigmar1O55242 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sigmar1O55242 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Sigmar1O55242 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sigmar1O55242 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sigmar1O55242 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sigmar1O55242 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sigmar1O55242 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sigmar1O55242 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sigmar1O55242 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.6■□□□□ 0.41
Sigmar1O55242 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.59■□□□□ 0.41
Sigmar1O55242 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sigmar1O55242 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sigmar1O55242 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sigmar1O55242 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sigmar1O55242 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sigmar1O55242 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sigmar1O55242 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sigmar1O55242 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sigmar1O55242 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sigmar1O55242 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.53■□□□□ 0.4
Sigmar1O55242 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sigmar1O55242 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sigmar1O55242 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sigmar1O55242 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Sigmar1O55242 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sigmar1O55242 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sigmar1O55242 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sigmar1O55242 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sigmar1O55242 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sigmar1O55242 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Sigmar1O55242 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sigmar1O55242 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sigmar1O55242 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sigmar1O55242 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sigmar1O55242 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.45■□□□□ 0.38
Sigmar1O55242 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sigmar1O55242 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.44■□□□□ 0.38
Sigmar1O55242 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sigmar1O55242 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sigmar1O55242 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sigmar1O55242 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sigmar1O55242 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sigmar1O55242 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sigmar1O55242 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sigmar1O55242 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.41■□□□□ 0.38
Sigmar1O55242 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sigmar1O55242 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sigmar1O55242 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sigmar1O55242 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sigmar1O55242 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sigmar1O55242 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sigmar1O55242 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sigmar1O55242 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sigmar1O55242 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sigmar1O55242 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sigmar1O55242 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sigmar1O55242 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sigmar1O55242 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sigmar1O55242 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sigmar1O55242 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sigmar1O55242 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sigmar1O55242 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sigmar1O55242 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sigmar1O55242 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sigmar1O55242 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sigmar1O55242 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sigmar1O55242 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.34■□□□□ 0.37
Sigmar1O55242 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Sigmar1O55242 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sigmar1O55242 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 122.3 ms