Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Phox2bO35690 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Phox2bO35690 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Phox2bO35690 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Phox2bO35690 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Phox2bO35690 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
Phox2bO35690 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Phox2bO35690 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.78■■□□□ 1.88
Phox2bO35690 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Phox2bO35690 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.75■■□□□ 1.87
Phox2bO35690 Gm9397-201ENSMUST00000200125 605 ntBASIC26.73■■□□□ 1.87
Phox2bO35690 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Phox2bO35690 Peli2-204ENSMUST00000226513 1320 ntBASIC26.71■■□□□ 1.87
Phox2bO35690 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Phox2bO35690 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Phox2bO35690 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Phox2bO35690 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Phox2bO35690 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.64■■□□□ 1.86
Phox2bO35690 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Phox2bO35690 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Phox2bO35690 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Phox2bO35690 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Phox2bO35690 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.59■■□□□ 1.85
Phox2bO35690 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.58■■□□□ 1.85
Phox2bO35690 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Phox2bO35690 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Phox2bO35690 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.55■■□□□ 1.84
Phox2bO35690 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Phox2bO35690 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
Phox2bO35690 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Phox2bO35690 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.49■■□□□ 1.83
Phox2bO35690 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Phox2bO35690 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.48■■□□□ 1.83
Phox2bO35690 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Phox2bO35690 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Phox2bO35690 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Phox2bO35690 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Phox2bO35690 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Phox2bO35690 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Phox2bO35690 Gm8503-201ENSMUST00000118131 455 ntBASIC26.42■■□□□ 1.82
Phox2bO35690 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Phox2bO35690 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Phox2bO35690 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Phox2bO35690 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.37■■□□□ 1.81
Phox2bO35690 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Phox2bO35690 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.31■■□□□ 1.8
Phox2bO35690 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.31■■□□□ 1.8
Phox2bO35690 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Phox2bO35690 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.29■■□□□ 1.8
Phox2bO35690 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.29■■□□□ 1.8
Phox2bO35690 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.28■■□□□ 1.8
Phox2bO35690 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.28■■□□□ 1.8
Phox2bO35690 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Phox2bO35690 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Phox2bO35690 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Phox2bO35690 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.25■■□□□ 1.79
Phox2bO35690 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Phox2bO35690 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Phox2bO35690 Gm6821-201ENSMUST00000107540 542 ntBASIC26.22■■□□□ 1.79
Phox2bO35690 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.18■■□□□ 1.78
Phox2bO35690 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Phox2bO35690 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Phox2bO35690 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.14■■□□□ 1.78
Phox2bO35690 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.14■■□□□ 1.78
Phox2bO35690 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.14■■□□□ 1.77
Phox2bO35690 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Phox2bO35690 Gm24970-201ENSMUST00000175582 82 ntBASIC26.12■■□□□ 1.77
Phox2bO35690 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Phox2bO35690 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Phox2bO35690 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.1■■□□□ 1.77
Phox2bO35690 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Phox2bO35690 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
Phox2bO35690 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Phox2bO35690 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Phox2bO35690 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Phox2bO35690 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Phox2bO35690 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Phox2bO35690 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Phox2bO35690 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.95■■□□□ 1.75
Phox2bO35690 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Phox2bO35690 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.93■■□□□ 1.74
Phox2bO35690 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Phox2bO35690 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Phox2bO35690 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Phox2bO35690 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.88■■□□□ 1.73
Phox2bO35690 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
Phox2bO35690 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Phox2bO35690 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.73
Phox2bO35690 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Phox2bO35690 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Phox2bO35690 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Phox2bO35690 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Phox2bO35690 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.78■■□□□ 1.72
Phox2bO35690 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Phox2bO35690 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Phox2bO35690 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
Phox2bO35690 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Phox2bO35690 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Phox2bO35690 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.7■■□□□ 1.7
Phox2bO35690 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms