Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Tdp2-203ENSMUST00000223804 1136 ntBASIC35.19■■■■□ 3.22
Col15a1O35206 Mipep-204ENSMUST00000225043 1548 ntBASIC35.17■■■■□ 3.22
Col15a1O35206 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC35.16■■■■□ 3.22
Col15a1O35206 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC35.14■■■■□ 3.22
Col15a1O35206 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
Col15a1O35206 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC35.13■■■■□ 3.21
Col15a1O35206 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC35.11■■■■□ 3.21
Col15a1O35206 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC35.09■■■■□ 3.21
Col15a1O35206 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Col15a1O35206 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC35.05■■■■□ 3.2
Col15a1O35206 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Col15a1O35206 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC35■■■■□ 3.19
Col15a1O35206 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC35■■■■□ 3.19
Col15a1O35206 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Col15a1O35206 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC34.95■■■■□ 3.19
Col15a1O35206 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Col15a1O35206 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Col15a1O35206 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Col15a1O35206 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.93■■■■□ 3.18
Col15a1O35206 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC34.93■■■■□ 3.18
Col15a1O35206 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Col15a1O35206 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Col15a1O35206 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC34.85■■■■□ 3.17
Col15a1O35206 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Col15a1O35206 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC34.81■■■■□ 3.16
Col15a1O35206 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Col15a1O35206 Gm45855-201ENSMUST00000212546 880 ntBASIC34.8■■■■□ 3.16
Col15a1O35206 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC34.78■■■■□ 3.16
Col15a1O35206 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC34.77■■■■□ 3.16
Col15a1O35206 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC34.74■■■■□ 3.15
Col15a1O35206 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC34.73■■■■□ 3.15
Col15a1O35206 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC34.69■■■■□ 3.14
Col15a1O35206 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Col15a1O35206 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Col15a1O35206 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Col15a1O35206 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
Col15a1O35206 Gm9397-201ENSMUST00000200125 605 ntBASIC34.66■■■■□ 3.14
Col15a1O35206 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC34.66■■■■□ 3.14
Col15a1O35206 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC34.63■■■■□ 3.13
Col15a1O35206 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Col15a1O35206 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Col15a1O35206 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC34.61■■■■□ 3.13
Col15a1O35206 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Col15a1O35206 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Col15a1O35206 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Col15a1O35206 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Col15a1O35206 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
Col15a1O35206 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC34.5■■■■□ 3.11
Col15a1O35206 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Col15a1O35206 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Col15a1O35206 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Col15a1O35206 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC34.49■■■■□ 3.11
Col15a1O35206 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC34.49■■■■□ 3.11
Col15a1O35206 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Col15a1O35206 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC34.47■■■■□ 3.11
Col15a1O35206 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
Col15a1O35206 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Col15a1O35206 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
Col15a1O35206 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Col15a1O35206 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Col15a1O35206 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC34.42■■■■□ 3.1
Col15a1O35206 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC34.4■■■■□ 3.1
Col15a1O35206 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Col15a1O35206 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC34.37■■■■□ 3.09
Col15a1O35206 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC34.36■■■■□ 3.09
Col15a1O35206 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Col15a1O35206 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Col15a1O35206 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC34.33■■■■□ 3.09
Col15a1O35206 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC34.32■■■■□ 3.09
Col15a1O35206 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Col15a1O35206 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC34.32■■■■□ 3.08
Col15a1O35206 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Col15a1O35206 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC34.27■■■■□ 3.08
Col15a1O35206 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Col15a1O35206 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC34.23■■■■□ 3.07
Col15a1O35206 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Col15a1O35206 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
Col15a1O35206 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC34.22■■■■□ 3.07
Col15a1O35206 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Col15a1O35206 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Col15a1O35206 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC34.21■■■■□ 3.07
Col15a1O35206 Gm24970-201ENSMUST00000175582 82 ntBASIC34.18■■■■□ 3.06
Col15a1O35206 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC34.17■■■■□ 3.06
Col15a1O35206 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC34.15■■■■□ 3.06
Col15a1O35206 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Col15a1O35206 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC34.13■■■■□ 3.05
Col15a1O35206 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC34.12■■■■□ 3.05
Col15a1O35206 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC34.1■■■■□ 3.05
Col15a1O35206 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Col15a1O35206 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Col15a1O35206 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Col15a1O35206 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Col15a1O35206 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
Col15a1O35206 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC34.06■■■■□ 3.04
Col15a1O35206 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Col15a1O35206 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC34.04■■■■□ 3.04
Col15a1O35206 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Col15a1O35206 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC34.03■■■■□ 3.04
Col15a1O35206 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC34.03■■■■□ 3.04
Col15a1O35206 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC34.03■■■■□ 3.04
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms