Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Hdac1O09106 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hdac1O09106 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Hdac1O09106 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Hdac1O09106 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Hdac1O09106 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Hdac1O09106 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
Hdac1O09106 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
Hdac1O09106 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
Hdac1O09106 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Hdac1O09106 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Hdac1O09106 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Hdac1O09106 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.34■■■□□ 2.61
Hdac1O09106 Mipep-204ENSMUST00000225043 1548 ntBASIC31.3■■■□□ 2.6
Hdac1O09106 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.29■■■□□ 2.6
Hdac1O09106 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Hdac1O09106 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Hdac1O09106 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Hdac1O09106 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Hdac1O09106 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Hdac1O09106 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Hdac1O09106 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Hdac1O09106 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Hdac1O09106 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.22■■■□□ 2.59
Hdac1O09106 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.21■■■□□ 2.59
Hdac1O09106 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Hdac1O09106 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Hdac1O09106 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Hdac1O09106 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Hdac1O09106 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Hdac1O09106 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Hdac1O09106 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Hdac1O09106 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Hdac1O09106 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Hdac1O09106 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Hdac1O09106 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.12■■■□□ 2.57
Hdac1O09106 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Hdac1O09106 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Hdac1O09106 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
Hdac1O09106 Zxda-201ENSMUST00000117281 2621 ntBASIC31.1■■■□□ 2.57
Hdac1O09106 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Hdac1O09106 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Hdac1O09106 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Hdac1O09106 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Hdac1O09106 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.02■■■□□ 2.56
Hdac1O09106 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Hdac1O09106 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Hdac1O09106 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Hdac1O09106 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
Hdac1O09106 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
Hdac1O09106 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
Hdac1O09106 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.93■■■□□ 2.54
Hdac1O09106 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
Hdac1O09106 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Hdac1O09106 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Hdac1O09106 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.91■■■□□ 2.54
Hdac1O09106 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Hdac1O09106 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Hdac1O09106 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Hdac1O09106 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Hdac1O09106 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Hdac1O09106 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Hdac1O09106 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Hdac1O09106 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Hdac1O09106 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Hdac1O09106 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Hdac1O09106 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Hdac1O09106 Gm25262-201ENSMUST00000174934 133 ntBASIC30.74■■■□□ 2.51
Hdac1O09106 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.73■■■□□ 2.51
Hdac1O09106 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Hdac1O09106 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Hdac1O09106 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
Hdac1O09106 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.69■■■□□ 2.5
Hdac1O09106 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Hdac1O09106 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Hdac1O09106 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.63■■■□□ 2.49
Hdac1O09106 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Hdac1O09106 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Hdac1O09106 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Hdac1O09106 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Hdac1O09106 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Hdac1O09106 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Hdac1O09106 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Hdac1O09106 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.59■■■□□ 2.49
Hdac1O09106 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Hdac1O09106 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Hdac1O09106 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Hdac1O09106 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Hdac1O09106 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Hdac1O09106 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Hdac1O09106 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.53■■■□□ 2.48
Hdac1O09106 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Hdac1O09106 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.51■■■□□ 2.47
Hdac1O09106 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.5■■■□□ 2.47
Hdac1O09106 Amer2-203ENSMUST00000225247 2662 ntBASIC30.5■■■□□ 2.47
Hdac1O09106 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Hdac1O09106 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Hdac1O09106 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hdac1O09106 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Hdac1O09106 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms