Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2al1kJ3QP08 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2al1kJ3QP08 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2al1kJ3QP08 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2al1kJ3QP08 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2al1kJ3QP08 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2al1kJ3QP08 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2al1kJ3QP08 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
H2al1kJ3QP08 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2al1kJ3QP08 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2al1kJ3QP08 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2al1kJ3QP08 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2al1kJ3QP08 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2al1kJ3QP08 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
H2al1kJ3QP08 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
H2al1kJ3QP08 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
H2al1kJ3QP08 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2al1kJ3QP08 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2al1kJ3QP08 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC15.29■□□□□ 0.04
H2al1kJ3QP08 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
H2al1kJ3QP08 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2al1kJ3QP08 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
H2al1kJ3QP08 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2al1kJ3QP08 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2al1kJ3QP08 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H2al1kJ3QP08 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2al1kJ3QP08 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC15.27■□□□□ 0.03
H2al1kJ3QP08 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H2al1kJ3QP08 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2al1kJ3QP08 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2al1kJ3QP08 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2al1kJ3QP08 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
H2al1kJ3QP08 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2al1kJ3QP08 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
H2al1kJ3QP08 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2al1kJ3QP08 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2al1kJ3QP08 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H2al1kJ3QP08 Gm9905-201ENSMUST00000065740 1845 ntBASIC15.21■□□□□ 0.03
H2al1kJ3QP08 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2al1kJ3QP08 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2al1kJ3QP08 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
H2al1kJ3QP08 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2al1kJ3QP08 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2al1kJ3QP08 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC15.18■□□□□ 0.02
H2al1kJ3QP08 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2al1kJ3QP08 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2al1kJ3QP08 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2al1kJ3QP08 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2al1kJ3QP08 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2al1kJ3QP08 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2al1kJ3QP08 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
H2al1kJ3QP08 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2al1kJ3QP08 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2al1kJ3QP08 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.12■□□□□ 0.01
H2al1kJ3QP08 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2al1kJ3QP08 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2al1kJ3QP08 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2al1kJ3QP08 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2al1kJ3QP08 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.08■□□□□ 0
H2al1kJ3QP08 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC15.08■□□□□ 0
H2al1kJ3QP08 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
H2al1kJ3QP08 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
H2al1kJ3QP08 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
H2al1kJ3QP08 CT025624.2-201ENSMUST00000223609 1909 ntBASIC15.07■□□□□ 0
H2al1kJ3QP08 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
H2al1kJ3QP08 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
H2al1kJ3QP08 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2al1kJ3QP08 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
H2al1kJ3QP08 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
H2al1kJ3QP08 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC15.05■□□□□ -0
H2al1kJ3QP08 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
H2al1kJ3QP08 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
H2al1kJ3QP08 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2al1kJ3QP08 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
H2al1kJ3QP08 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2al1kJ3QP08 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2al1kJ3QP08 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2al1kJ3QP08 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
H2al1kJ3QP08 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2al1kJ3QP08 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2al1kJ3QP08 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H2al1kJ3QP08 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2al1kJ3QP08 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2al1kJ3QP08 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2al1kJ3QP08 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2al1kJ3QP08 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2al1kJ3QP08 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC14.95□□□□□ -0.02
H2al1kJ3QP08 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2al1kJ3QP08 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2al1kJ3QP08 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
H2al1kJ3QP08 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
H2al1kJ3QP08 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
H2al1kJ3QP08 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2al1kJ3QP08 Gm10524-201ENSMUST00000181931 1893 ntBASIC14.93□□□□□ -0.02
H2al1kJ3QP08 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2al1kJ3QP08 Gm6206-201ENSMUST00000133472 2199 ntBASIC14.92□□□□□ -0.02
H2al1kJ3QP08 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2al1kJ3QP08 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H2al1kJ3QP08 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2al1kJ3QP08 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms