Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Rpl13a-ps1A0A140T8K2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rpl13a-ps1A0A140T8K2 Peli2-204ENSMUST00000226513 1320 ntBASIC21.83■■□□□ 1.09
Rpl13a-ps1A0A140T8K2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.83■■□□□ 1.09
Rpl13a-ps1A0A140T8K2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpl13a-ps1A0A140T8K2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rpl13a-ps1A0A140T8K2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.81■■□□□ 1.08
Rpl13a-ps1A0A140T8K2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpl13a-ps1A0A140T8K2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.76■■□□□ 1.07
Rpl13a-ps1A0A140T8K2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpl13a-ps1A0A140T8K2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.74■■□□□ 1.07
Rpl13a-ps1A0A140T8K2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpl13a-ps1A0A140T8K2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rpl13a-ps1A0A140T8K2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.71■■□□□ 1.07
Rpl13a-ps1A0A140T8K2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpl13a-ps1A0A140T8K2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpl13a-ps1A0A140T8K2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rpl13a-ps1A0A140T8K2 Mipep-204ENSMUST00000225043 1548 ntBASIC21.66■■□□□ 1.06
Rpl13a-ps1A0A140T8K2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rpl13a-ps1A0A140T8K2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rpl13a-ps1A0A140T8K2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpl13a-ps1A0A140T8K2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.62■■□□□ 1.05
Rpl13a-ps1A0A140T8K2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.62■■□□□ 1.05
Rpl13a-ps1A0A140T8K2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpl13a-ps1A0A140T8K2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rpl13a-ps1A0A140T8K2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.59■■□□□ 1.05
Rpl13a-ps1A0A140T8K2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.59■■□□□ 1.05
Rpl13a-ps1A0A140T8K2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Rpl13a-ps1A0A140T8K2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rpl13a-ps1A0A140T8K2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Rpl13a-ps1A0A140T8K2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rpl13a-ps1A0A140T8K2 Gm45855-201ENSMUST00000212546 880 ntBASIC21.56■■□□□ 1.04
Rpl13a-ps1A0A140T8K2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rpl13a-ps1A0A140T8K2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpl13a-ps1A0A140T8K2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpl13a-ps1A0A140T8K2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.53■■□□□ 1.04
Rpl13a-ps1A0A140T8K2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rpl13a-ps1A0A140T8K2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rpl13a-ps1A0A140T8K2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpl13a-ps1A0A140T8K2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rpl13a-ps1A0A140T8K2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpl13a-ps1A0A140T8K2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpl13a-ps1A0A140T8K2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Rpl13a-ps1A0A140T8K2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Rpl13a-ps1A0A140T8K2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Rpl13a-ps1A0A140T8K2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Rpl13a-ps1A0A140T8K2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpl13a-ps1A0A140T8K2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpl13a-ps1A0A140T8K2 Gm9397-201ENSMUST00000200125 605 ntBASIC21.4■■□□□ 1.02
Rpl13a-ps1A0A140T8K2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.4■■□□□ 1.02
Rpl13a-ps1A0A140T8K2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rpl13a-ps1A0A140T8K2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpl13a-ps1A0A140T8K2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpl13a-ps1A0A140T8K2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rpl13a-ps1A0A140T8K2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rpl13a-ps1A0A140T8K2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Rpl13a-ps1A0A140T8K2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpl13a-ps1A0A140T8K2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpl13a-ps1A0A140T8K2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rpl13a-ps1A0A140T8K2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rpl13a-ps1A0A140T8K2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.31■■□□□ 1
Rpl13a-ps1A0A140T8K2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rpl13a-ps1A0A140T8K2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpl13a-ps1A0A140T8K2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpl13a-ps1A0A140T8K2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.3■■□□□ 1
Rpl13a-ps1A0A140T8K2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.29■■□□□ 1
Rpl13a-ps1A0A140T8K2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.29■■□□□ 1
Rpl13a-ps1A0A140T8K2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rpl13a-ps1A0A140T8K2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rpl13a-ps1A0A140T8K2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.28■■□□□ 1
Rpl13a-ps1A0A140T8K2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rpl13a-ps1A0A140T8K2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rpl13a-ps1A0A140T8K2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rpl13a-ps1A0A140T8K2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rpl13a-ps1A0A140T8K2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rpl13a-ps1A0A140T8K2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rpl13a-ps1A0A140T8K2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpl13a-ps1A0A140T8K2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpl13a-ps1A0A140T8K2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.24■□□□□ 0.99
Rpl13a-ps1A0A140T8K2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rpl13a-ps1A0A140T8K2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.22■□□□□ 0.99
Rpl13a-ps1A0A140T8K2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpl13a-ps1A0A140T8K2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Rpl13a-ps1A0A140T8K2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rpl13a-ps1A0A140T8K2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpl13a-ps1A0A140T8K2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpl13a-ps1A0A140T8K2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Rpl13a-ps1A0A140T8K2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpl13a-ps1A0A140T8K2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl13a-ps1A0A140T8K2 Gm24970-201ENSMUST00000175582 82 ntBASIC21.17■□□□□ 0.98
Rpl13a-ps1A0A140T8K2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpl13a-ps1A0A140T8K2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.14■□□□□ 0.97
Rpl13a-ps1A0A140T8K2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpl13a-ps1A0A140T8K2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.13■□□□□ 0.97
Rpl13a-ps1A0A140T8K2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Rpl13a-ps1A0A140T8K2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpl13a-ps1A0A140T8K2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl13a-ps1A0A140T8K2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl13a-ps1A0A140T8K2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl13a-ps1A0A140T8K2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms