Protein–RNA interactions for Protein: A0A140LJJ2

Gm13420, Predicted gene 13420, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm13420A0A140LJJ2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Gm13420A0A140LJJ2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Gm13420A0A140LJJ2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Gm13420A0A140LJJ2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Gm13420A0A140LJJ2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Gm13420A0A140LJJ2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Gm13420A0A140LJJ2 Gm26115-201ENSMUST00000175605 87 ntBASIC24.82■■□□□ 1.56
Gm13420A0A140LJJ2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Gm13420A0A140LJJ2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Gm13420A0A140LJJ2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Gm13420A0A140LJJ2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Gm13420A0A140LJJ2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Gm13420A0A140LJJ2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Gm13420A0A140LJJ2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Gm13420A0A140LJJ2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Gm13420A0A140LJJ2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Gm13420A0A140LJJ2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Gm13420A0A140LJJ2 Gm8109-201ENSMUST00000194076 746 ntBASIC24.74■■□□□ 1.55
Gm13420A0A140LJJ2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Gm13420A0A140LJJ2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
Gm13420A0A140LJJ2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Gm13420A0A140LJJ2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Gm13420A0A140LJJ2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Gm13420A0A140LJJ2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Gm13420A0A140LJJ2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Gm13420A0A140LJJ2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Gm13420A0A140LJJ2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Gm13420A0A140LJJ2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Gm13420A0A140LJJ2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Gm13420A0A140LJJ2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.58■■□□□ 1.53
Gm13420A0A140LJJ2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Gm13420A0A140LJJ2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Gm13420A0A140LJJ2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Gm13420A0A140LJJ2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Gm13420A0A140LJJ2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.54■■□□□ 1.52
Gm13420A0A140LJJ2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Gm13420A0A140LJJ2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Gm13420A0A140LJJ2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Gm13420A0A140LJJ2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Gm13420A0A140LJJ2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Gm13420A0A140LJJ2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Gm13420A0A140LJJ2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Gm13420A0A140LJJ2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.49■■□□□ 1.51
Gm13420A0A140LJJ2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Gm13420A0A140LJJ2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
Gm13420A0A140LJJ2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Gm13420A0A140LJJ2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm13420A0A140LJJ2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm13420A0A140LJJ2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Gm13420A0A140LJJ2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm13420A0A140LJJ2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm13420A0A140LJJ2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm13420A0A140LJJ2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Gm13420A0A140LJJ2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Gm13420A0A140LJJ2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.42■■□□□ 1.5
Gm13420A0A140LJJ2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.42■■□□□ 1.5
Gm13420A0A140LJJ2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Gm13420A0A140LJJ2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Gm13420A0A140LJJ2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Gm13420A0A140LJJ2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Gm13420A0A140LJJ2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Gm13420A0A140LJJ2 Peli2-204ENSMUST00000226513 1320 ntBASIC24.35■■□□□ 1.49
Gm13420A0A140LJJ2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Gm13420A0A140LJJ2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Gm13420A0A140LJJ2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm13420A0A140LJJ2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm13420A0A140LJJ2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Gm13420A0A140LJJ2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Gm13420A0A140LJJ2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Gm13420A0A140LJJ2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Gm13420A0A140LJJ2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Gm13420A0A140LJJ2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.31■■□□□ 1.48
Gm13420A0A140LJJ2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.31■■□□□ 1.48
Gm13420A0A140LJJ2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Gm13420A0A140LJJ2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.31■■□□□ 1.48
Gm13420A0A140LJJ2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Gm13420A0A140LJJ2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Gm13420A0A140LJJ2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.28■■□□□ 1.48
Gm13420A0A140LJJ2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
Gm13420A0A140LJJ2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Gm13420A0A140LJJ2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Gm13420A0A140LJJ2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.23■■□□□ 1.47
Gm13420A0A140LJJ2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm13420A0A140LJJ2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.22■■□□□ 1.47
Gm13420A0A140LJJ2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Gm13420A0A140LJJ2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Gm13420A0A140LJJ2 Gm24804-201ENSMUST00000174982 85 ntBASIC24.2■■□□□ 1.46
Gm13420A0A140LJJ2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Gm13420A0A140LJJ2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Gm13420A0A140LJJ2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Gm13420A0A140LJJ2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Gm13420A0A140LJJ2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Gm13420A0A140LJJ2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Gm13420A0A140LJJ2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Gm13420A0A140LJJ2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.14■■□□□ 1.46
Gm13420A0A140LJJ2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Gm13420A0A140LJJ2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Gm13420A0A140LJJ2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Gm13420A0A140LJJ2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Gm13420A0A140LJJ2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.11■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms