Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Cfap99A0A140LIX9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
Cfap99A0A140LIX9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Cfap99A0A140LIX9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Cfap99A0A140LIX9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Cfap99A0A140LIX9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cfap99A0A140LIX9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cfap99A0A140LIX9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cfap99A0A140LIX9 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.3■■■□□ 2.6
Cfap99A0A140LIX9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Cfap99A0A140LIX9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cfap99A0A140LIX9 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.23■■■□□ 2.59
Cfap99A0A140LIX9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Cfap99A0A140LIX9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Cfap99A0A140LIX9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Cfap99A0A140LIX9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Cfap99A0A140LIX9 Peli2-204ENSMUST00000226513 1320 ntBASIC31.2■■■□□ 2.58
Cfap99A0A140LIX9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cfap99A0A140LIX9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Cfap99A0A140LIX9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.16■■■□□ 2.58
Cfap99A0A140LIX9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Cfap99A0A140LIX9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cfap99A0A140LIX9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cfap99A0A140LIX9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cfap99A0A140LIX9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.1■■■□□ 2.57
Cfap99A0A140LIX9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cfap99A0A140LIX9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
Cfap99A0A140LIX9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Cfap99A0A140LIX9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.06■■■□□ 2.56
Cfap99A0A140LIX9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.06■■■□□ 2.56
Cfap99A0A140LIX9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.05■■■□□ 2.56
Cfap99A0A140LIX9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.04■■■□□ 2.56
Cfap99A0A140LIX9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Cfap99A0A140LIX9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Cfap99A0A140LIX9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Cfap99A0A140LIX9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Cfap99A0A140LIX9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31■■■□□ 2.55
Cfap99A0A140LIX9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cfap99A0A140LIX9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.99■■■□□ 2.55
Cfap99A0A140LIX9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cfap99A0A140LIX9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.93■■■□□ 2.54
Cfap99A0A140LIX9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cfap99A0A140LIX9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cfap99A0A140LIX9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Cfap99A0A140LIX9 Mipep-204ENSMUST00000225043 1548 ntBASIC30.91■■■□□ 2.54
Cfap99A0A140LIX9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cfap99A0A140LIX9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Cfap99A0A140LIX9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Cfap99A0A140LIX9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Cfap99A0A140LIX9 Gm45855-201ENSMUST00000212546 880 ntBASIC30.82■■■□□ 2.52
Cfap99A0A140LIX9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cfap99A0A140LIX9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cfap99A0A140LIX9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
Cfap99A0A140LIX9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.78■■■□□ 2.52
Cfap99A0A140LIX9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Cfap99A0A140LIX9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.76■■■□□ 2.52
Cfap99A0A140LIX9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cfap99A0A140LIX9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cfap99A0A140LIX9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
Cfap99A0A140LIX9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cfap99A0A140LIX9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Cfap99A0A140LIX9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Cfap99A0A140LIX9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cfap99A0A140LIX9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cfap99A0A140LIX9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Cfap99A0A140LIX9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cfap99A0A140LIX9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cfap99A0A140LIX9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cfap99A0A140LIX9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Cfap99A0A140LIX9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cfap99A0A140LIX9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cfap99A0A140LIX9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.63■■■□□ 2.49
Cfap99A0A140LIX9 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.63■■■□□ 2.49
Cfap99A0A140LIX9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cfap99A0A140LIX9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Cfap99A0A140LIX9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Cfap99A0A140LIX9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Cfap99A0A140LIX9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cfap99A0A140LIX9 Gm9397-201ENSMUST00000200125 605 ntBASIC30.55■■■□□ 2.48
Cfap99A0A140LIX9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Cfap99A0A140LIX9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.51■■■□□ 2.47
Cfap99A0A140LIX9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Cfap99A0A140LIX9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.5■■■□□ 2.47
Cfap99A0A140LIX9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cfap99A0A140LIX9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cfap99A0A140LIX9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Cfap99A0A140LIX9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Cfap99A0A140LIX9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.47■■■□□ 2.47
Cfap99A0A140LIX9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Cfap99A0A140LIX9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Cfap99A0A140LIX9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Cfap99A0A140LIX9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Cfap99A0A140LIX9 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.43■■■□□ 2.46
Cfap99A0A140LIX9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.42■■■□□ 2.46
Cfap99A0A140LIX9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.41■■■□□ 2.46
Cfap99A0A140LIX9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Cfap99A0A140LIX9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.4■■■□□ 2.46
Cfap99A0A140LIX9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Cfap99A0A140LIX9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Cfap99A0A140LIX9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms