Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv8-28A0A0G2JE47 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv8-28A0A0G2JE47 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv8-28A0A0G2JE47 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv8-28A0A0G2JE47 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv8-28A0A0G2JE47 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv8-28A0A0G2JE47 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv8-28A0A0G2JE47 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv8-28A0A0G2JE47 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv8-28A0A0G2JE47 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Igkv8-28A0A0G2JE47 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Igkv8-28A0A0G2JE47 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv8-28A0A0G2JE47 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Igkv8-28A0A0G2JE47 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Igkv8-28A0A0G2JE47 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Igkv8-28A0A0G2JE47 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.07■□□□□ 0.16
Igkv8-28A0A0G2JE47 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv8-28A0A0G2JE47 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv8-28A0A0G2JE47 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv8-28A0A0G2JE47 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
Igkv8-28A0A0G2JE47 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv8-28A0A0G2JE47 Zfp131-207ENSMUST00000224946 1783 ntBASIC16.05■□□□□ 0.16
Igkv8-28A0A0G2JE47 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv8-28A0A0G2JE47 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv8-28A0A0G2JE47 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv8-28A0A0G2JE47 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv8-28A0A0G2JE47 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Igkv8-28A0A0G2JE47 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv8-28A0A0G2JE47 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv8-28A0A0G2JE47 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Igkv8-28A0A0G2JE47 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16■□□□□ 0.15
Igkv8-28A0A0G2JE47 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv8-28A0A0G2JE47 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv8-28A0A0G2JE47 Gm43445-201ENSMUST00000198564 2091 ntBASIC15.99■□□□□ 0.15
Igkv8-28A0A0G2JE47 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv8-28A0A0G2JE47 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv8-28A0A0G2JE47 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv8-28A0A0G2JE47 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC15.98■□□□□ 0.15
Igkv8-28A0A0G2JE47 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv8-28A0A0G2JE47 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv8-28A0A0G2JE47 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv8-28A0A0G2JE47 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv8-28A0A0G2JE47 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv8-28A0A0G2JE47 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv8-28A0A0G2JE47 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv8-28A0A0G2JE47 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Igkv8-28A0A0G2JE47 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv8-28A0A0G2JE47 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv8-28A0A0G2JE47 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv8-28A0A0G2JE47 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv8-28A0A0G2JE47 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv8-28A0A0G2JE47 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv8-28A0A0G2JE47 Gm27325-201ENSMUST00000175467 74 ntBASIC15.91■□□□□ 0.14
Igkv8-28A0A0G2JE47 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv8-28A0A0G2JE47 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Igkv8-28A0A0G2JE47 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv8-28A0A0G2JE47 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv8-28A0A0G2JE47 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Igkv8-28A0A0G2JE47 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv8-28A0A0G2JE47 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv8-28A0A0G2JE47 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv8-28A0A0G2JE47 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv8-28A0A0G2JE47 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv8-28A0A0G2JE47 Amer2-203ENSMUST00000225247 2662 ntBASIC15.86■□□□□ 0.13
Igkv8-28A0A0G2JE47 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv8-28A0A0G2JE47 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv8-28A0A0G2JE47 Gm25238-201ENSMUST00000174914 89 ntBASIC15.86■□□□□ 0.13
Igkv8-28A0A0G2JE47 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Igkv8-28A0A0G2JE47 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Igkv8-28A0A0G2JE47 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Igkv8-28A0A0G2JE47 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv8-28A0A0G2JE47 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv8-28A0A0G2JE47 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Igkv8-28A0A0G2JE47 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv8-28A0A0G2JE47 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv8-28A0A0G2JE47 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Igkv8-28A0A0G2JE47 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Igkv8-28A0A0G2JE47 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC15.8■□□□□ 0.12
Igkv8-28A0A0G2JE47 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC15.8■□□□□ 0.12
Igkv8-28A0A0G2JE47 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC15.8■□□□□ 0.12
Igkv8-28A0A0G2JE47 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv8-28A0A0G2JE47 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Igkv8-28A0A0G2JE47 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv8-28A0A0G2JE47 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv8-28A0A0G2JE47 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv8-28A0A0G2JE47 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv8-28A0A0G2JE47 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC15.78■□□□□ 0.12
Igkv8-28A0A0G2JE47 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv8-28A0A0G2JE47 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv8-28A0A0G2JE47 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv8-28A0A0G2JE47 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Igkv8-28A0A0G2JE47 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Igkv8-28A0A0G2JE47 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv8-28A0A0G2JE47 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv8-28A0A0G2JE47 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv8-28A0A0G2JE47 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Igkv8-28A0A0G2JE47 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Igkv8-28A0A0G2JE47 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv8-28A0A0G2JE47 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv8-28A0A0G2JE47 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms