Protein–RNA interactions for Protein: A0A0G2JDF5

Trav14n-2, T cell receptor alpha variable 14D-2 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-2A0A0G2JDF5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Gm27325-201ENSMUST00000175467 74 ntBASIC18.99■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.97■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav14n-2A0A0G2JDF5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav14n-2A0A0G2JDF5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav14n-2A0A0G2JDF5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav14n-2A0A0G2JDF5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav14n-2A0A0G2JDF5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav14n-2A0A0G2JDF5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav14n-2A0A0G2JDF5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav14n-2A0A0G2JDF5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav14n-2A0A0G2JDF5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav14n-2A0A0G2JDF5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav14n-2A0A0G2JDF5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trav14n-2A0A0G2JDF5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav14n-2A0A0G2JDF5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav14n-2A0A0G2JDF5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav14n-2A0A0G2JDF5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.83■□□□□ 0.61
Trav14n-2A0A0G2JDF5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav14n-2A0A0G2JDF5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav14n-2A0A0G2JDF5 Amer2-203ENSMUST00000225247 2662 ntBASIC18.76■□□□□ 0.59
Trav14n-2A0A0G2JDF5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav14n-2A0A0G2JDF5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav14n-2A0A0G2JDF5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav14n-2A0A0G2JDF5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav14n-2A0A0G2JDF5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav14n-2A0A0G2JDF5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Trav14n-2A0A0G2JDF5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trav14n-2A0A0G2JDF5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav14n-2A0A0G2JDF5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav14n-2A0A0G2JDF5 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.67■□□□□ 0.58
Trav14n-2A0A0G2JDF5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.67■□□□□ 0.58
Trav14n-2A0A0G2JDF5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav14n-2A0A0G2JDF5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav14n-2A0A0G2JDF5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav14n-2A0A0G2JDF5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav14n-2A0A0G2JDF5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trav14n-2A0A0G2JDF5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav14n-2A0A0G2JDF5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.64■□□□□ 0.57
Trav14n-2A0A0G2JDF5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trav14n-2A0A0G2JDF5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trav14n-2A0A0G2JDF5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav14n-2A0A0G2JDF5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav14n-2A0A0G2JDF5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav14n-2A0A0G2JDF5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trav14n-2A0A0G2JDF5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav14n-2A0A0G2JDF5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav14n-2A0A0G2JDF5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav14n-2A0A0G2JDF5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trav14n-2A0A0G2JDF5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav14n-2A0A0G2JDF5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trav14n-2A0A0G2JDF5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trav14n-2A0A0G2JDF5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav14n-2A0A0G2JDF5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav14n-2A0A0G2JDF5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.53■□□□□ 0.56
Trav14n-2A0A0G2JDF5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav14n-2A0A0G2JDF5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Trav14n-2A0A0G2JDF5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.52■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav14n-2A0A0G2JDF5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav14n-2A0A0G2JDF5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms