Protein–RNA interactions for Protein: A0A0B4J1N1

C920008G01Rik, RIKEN cDNA C920008G01 gene (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C920008G01RikA0A0B4J1N1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C920008G01RikA0A0B4J1N1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C920008G01RikA0A0B4J1N1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C920008G01RikA0A0B4J1N1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
C920008G01RikA0A0B4J1N1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C920008G01RikA0A0B4J1N1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.78■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.73■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Amer2-203ENSMUST00000225247 2662 ntBASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.63■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C920008G01RikA0A0B4J1N1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.51■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.44■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.4■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C920008G01RikA0A0B4J1N1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.38■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Gm27325-201ENSMUST00000175467 74 ntBASIC17.35■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.35■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms