Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav19A0A0B4J1K4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav19A0A0B4J1K4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav19A0A0B4J1K4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav19A0A0B4J1K4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav19A0A0B4J1K4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trav19A0A0B4J1K4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav19A0A0B4J1K4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav19A0A0B4J1K4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav19A0A0B4J1K4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trav19A0A0B4J1K4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav19A0A0B4J1K4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav19A0A0B4J1K4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav19A0A0B4J1K4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav19A0A0B4J1K4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trav19A0A0B4J1K4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav19A0A0B4J1K4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav19A0A0B4J1K4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav19A0A0B4J1K4 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.21■□□□□ 0.67
Trav19A0A0B4J1K4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trav19A0A0B4J1K4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trav19A0A0B4J1K4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trav19A0A0B4J1K4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav19A0A0B4J1K4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav19A0A0B4J1K4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav19A0A0B4J1K4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trav19A0A0B4J1K4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav19A0A0B4J1K4 Mipep-204ENSMUST00000225043 1548 ntBASIC19.18■□□□□ 0.66
Trav19A0A0B4J1K4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav19A0A0B4J1K4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav19A0A0B4J1K4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.16■□□□□ 0.66
Trav19A0A0B4J1K4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav19A0A0B4J1K4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav19A0A0B4J1K4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav19A0A0B4J1K4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav19A0A0B4J1K4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav19A0A0B4J1K4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav19A0A0B4J1K4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav19A0A0B4J1K4 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.12■□□□□ 0.65
Trav19A0A0B4J1K4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trav19A0A0B4J1K4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav19A0A0B4J1K4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav19A0A0B4J1K4 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.1■□□□□ 0.65
Trav19A0A0B4J1K4 Zxda-201ENSMUST00000117281 2621 ntBASIC19.08■□□□□ 0.65
Trav19A0A0B4J1K4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav19A0A0B4J1K4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.08■□□□□ 0.64
Trav19A0A0B4J1K4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.08■□□□□ 0.64
Trav19A0A0B4J1K4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.08■□□□□ 0.64
Trav19A0A0B4J1K4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav19A0A0B4J1K4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav19A0A0B4J1K4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav19A0A0B4J1K4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trav19A0A0B4J1K4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trav19A0A0B4J1K4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav19A0A0B4J1K4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav19A0A0B4J1K4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav19A0A0B4J1K4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav19A0A0B4J1K4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav19A0A0B4J1K4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav19A0A0B4J1K4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav19A0A0B4J1K4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav19A0A0B4J1K4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trav19A0A0B4J1K4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav19A0A0B4J1K4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav19A0A0B4J1K4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav19A0A0B4J1K4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav19A0A0B4J1K4 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.96■□□□□ 0.63
Trav19A0A0B4J1K4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav19A0A0B4J1K4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.62
Trav19A0A0B4J1K4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav19A0A0B4J1K4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav19A0A0B4J1K4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav19A0A0B4J1K4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav19A0A0B4J1K4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Trav19A0A0B4J1K4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav19A0A0B4J1K4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav19A0A0B4J1K4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trav19A0A0B4J1K4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav19A0A0B4J1K4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
Trav19A0A0B4J1K4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav19A0A0B4J1K4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav19A0A0B4J1K4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav19A0A0B4J1K4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav19A0A0B4J1K4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav19A0A0B4J1K4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav19A0A0B4J1K4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav19A0A0B4J1K4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Trav19A0A0B4J1K4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav19A0A0B4J1K4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav19A0A0B4J1K4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav19A0A0B4J1K4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav19A0A0B4J1K4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav19A0A0B4J1K4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav19A0A0B4J1K4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav19A0A0B4J1K4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav19A0A0B4J1K4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav19A0A0B4J1K4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav19A0A0B4J1K4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav19A0A0B4J1K4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav19A0A0B4J1K4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms