Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-56A0A0A6YXG2 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.38■□□□□ 0.37
Ighv1-56A0A0A6YXG2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-56A0A0A6YXG2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-56A0A0A6YXG2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-56A0A0A6YXG2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-56A0A0A6YXG2 Zxda-201ENSMUST00000117281 2621 ntBASIC17.36■□□□□ 0.37
Ighv1-56A0A0A6YXG2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-56A0A0A6YXG2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-56A0A0A6YXG2 Mipep-204ENSMUST00000225043 1548 ntBASIC17.35■□□□□ 0.37
Ighv1-56A0A0A6YXG2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-56A0A0A6YXG2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-56A0A0A6YXG2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-56A0A0A6YXG2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.31■□□□□ 0.36
Ighv1-56A0A0A6YXG2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-56A0A0A6YXG2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ighv1-56A0A0A6YXG2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-56A0A0A6YXG2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-56A0A0A6YXG2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-56A0A0A6YXG2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-56A0A0A6YXG2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.28■□□□□ 0.36
Ighv1-56A0A0A6YXG2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-56A0A0A6YXG2 Gm25262-201ENSMUST00000174934 133 ntBASIC17.28■□□□□ 0.36
Ighv1-56A0A0A6YXG2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-56A0A0A6YXG2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-56A0A0A6YXG2 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.24■□□□□ 0.35
Ighv1-56A0A0A6YXG2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-56A0A0A6YXG2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-56A0A0A6YXG2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-56A0A0A6YXG2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-56A0A0A6YXG2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-56A0A0A6YXG2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-56A0A0A6YXG2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-56A0A0A6YXG2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-56A0A0A6YXG2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-56A0A0A6YXG2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-56A0A0A6YXG2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-56A0A0A6YXG2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-56A0A0A6YXG2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-56A0A0A6YXG2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-56A0A0A6YXG2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-56A0A0A6YXG2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.14■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.12■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.11■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.1■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.09■□□□□ 0.33
Ighv1-56A0A0A6YXG2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-56A0A0A6YXG2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-56A0A0A6YXG2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-56A0A0A6YXG2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-56A0A0A6YXG2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-56A0A0A6YXG2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-56A0A0A6YXG2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.04■□□□□ 0.32
Ighv1-56A0A0A6YXG2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ighv1-56A0A0A6YXG2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-56A0A0A6YXG2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ighv1-56A0A0A6YXG2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-56A0A0A6YXG2 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.01■□□□□ 0.31
Ighv1-56A0A0A6YXG2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.99■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Gm27322-201ENSMUST00000184007 104 ntBASIC16.96■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ighv1-56A0A0A6YXG2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-56A0A0A6YXG2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms