Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.31■■□□□ 1.16
Trav6n-7A0A075B6A6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trav6n-7A0A075B6A6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trav6n-7A0A075B6A6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trav6n-7A0A075B6A6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Trav6n-7A0A075B6A6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.25■■□□□ 1.15
Trav6n-7A0A075B6A6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trav6n-7A0A075B6A6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.24■■□□□ 1.15
Trav6n-7A0A075B6A6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trav6n-7A0A075B6A6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trav6n-7A0A075B6A6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trav6n-7A0A075B6A6 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.21■■□□□ 1.15
Trav6n-7A0A075B6A6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Trav6n-7A0A075B6A6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav6n-7A0A075B6A6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trav6n-7A0A075B6A6 Gm24804-201ENSMUST00000174982 85 ntBASIC22.16■■□□□ 1.14
Trav6n-7A0A075B6A6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav6n-7A0A075B6A6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trav6n-7A0A075B6A6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Trav6n-7A0A075B6A6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trav6n-7A0A075B6A6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trav6n-7A0A075B6A6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trav6n-7A0A075B6A6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trav6n-7A0A075B6A6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trav6n-7A0A075B6A6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav6n-7A0A075B6A6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav6n-7A0A075B6A6 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.06■■□□□ 1.12
Trav6n-7A0A075B6A6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trav6n-7A0A075B6A6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.05■■□□□ 1.12
Trav6n-7A0A075B6A6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trav6n-7A0A075B6A6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trav6n-7A0A075B6A6 Peli2-204ENSMUST00000226513 1320 ntBASIC22.05■■□□□ 1.12
Trav6n-7A0A075B6A6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trav6n-7A0A075B6A6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trav6n-7A0A075B6A6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
Trav6n-7A0A075B6A6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trav6n-7A0A075B6A6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trav6n-7A0A075B6A6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trav6n-7A0A075B6A6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Trav6n-7A0A075B6A6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trav6n-7A0A075B6A6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Trav6n-7A0A075B6A6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.96■■□□□ 1.11
Trav6n-7A0A075B6A6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.96■■□□□ 1.11
Trav6n-7A0A075B6A6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trav6n-7A0A075B6A6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trav6n-7A0A075B6A6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trav6n-7A0A075B6A6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trav6n-7A0A075B6A6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trav6n-7A0A075B6A6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.9■■□□□ 1.1
Trav6n-7A0A075B6A6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trav6n-7A0A075B6A6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Trav6n-7A0A075B6A6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trav6n-7A0A075B6A6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.88■■□□□ 1.09
Trav6n-7A0A075B6A6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trav6n-7A0A075B6A6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Trav6n-7A0A075B6A6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trav6n-7A0A075B6A6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trav6n-7A0A075B6A6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trav6n-7A0A075B6A6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trav6n-7A0A075B6A6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trav6n-7A0A075B6A6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trav6n-7A0A075B6A6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trav6n-7A0A075B6A6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trav6n-7A0A075B6A6 Gm16148-201ENSMUST00000119653 893 ntBASIC21.79■■□□□ 1.08
Trav6n-7A0A075B6A6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trav6n-7A0A075B6A6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trav6n-7A0A075B6A6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trav6n-7A0A075B6A6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.76■■□□□ 1.07
Trav6n-7A0A075B6A6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Trav6n-7A0A075B6A6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav6n-7A0A075B6A6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav6n-7A0A075B6A6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trav6n-7A0A075B6A6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav6n-7A0A075B6A6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trav6n-7A0A075B6A6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trav6n-7A0A075B6A6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.71■■□□□ 1.07
Trav6n-7A0A075B6A6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Trav6n-7A0A075B6A6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Trav6n-7A0A075B6A6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav6n-7A0A075B6A6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
Trav6n-7A0A075B6A6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trav6n-7A0A075B6A6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav6n-7A0A075B6A6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav6n-7A0A075B6A6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav6n-7A0A075B6A6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav6n-7A0A075B6A6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trav6n-7A0A075B6A6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Trav6n-7A0A075B6A6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.66■■□□□ 1.06
Trav6n-7A0A075B6A6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav6n-7A0A075B6A6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Trav6n-7A0A075B6A6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.64■■□□□ 1.06
Trav6n-7A0A075B6A6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav6n-7A0A075B6A6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav6n-7A0A075B6A6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav6n-7A0A075B6A6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav6n-7A0A075B6A6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Trav6n-7A0A075B6A6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trav6n-7A0A075B6A6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav6n-7A0A075B6A6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trav6n-7A0A075B6A6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms