Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav4-4-dv10A0A075B651 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav4-4-dv10A0A075B651 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav4-4-dv10A0A075B651 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav4-4-dv10A0A075B651 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav4-4-dv10A0A075B651 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.27■□□□□ 0.83
Trav4-4-dv10A0A075B651 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trav4-4-dv10A0A075B651 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav4-4-dv10A0A075B651 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav4-4-dv10A0A075B651 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.25■□□□□ 0.83
Trav4-4-dv10A0A075B651 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav4-4-dv10A0A075B651 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav4-4-dv10A0A075B651 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trav4-4-dv10A0A075B651 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav4-4-dv10A0A075B651 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav4-4-dv10A0A075B651 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav4-4-dv10A0A075B651 Mipep-204ENSMUST00000225043 1548 ntBASIC20.22■□□□□ 0.83
Trav4-4-dv10A0A075B651 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav4-4-dv10A0A075B651 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trav4-4-dv10A0A075B651 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav4-4-dv10A0A075B651 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.18■□□□□ 0.82
Trav4-4-dv10A0A075B651 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav4-4-dv10A0A075B651 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav4-4-dv10A0A075B651 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav4-4-dv10A0A075B651 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav4-4-dv10A0A075B651 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav4-4-dv10A0A075B651 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.15■□□□□ 0.82
Trav4-4-dv10A0A075B651 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav4-4-dv10A0A075B651 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trav4-4-dv10A0A075B651 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav4-4-dv10A0A075B651 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav4-4-dv10A0A075B651 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Trav4-4-dv10A0A075B651 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.11■□□□□ 0.81
Trav4-4-dv10A0A075B651 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav4-4-dv10A0A075B651 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav4-4-dv10A0A075B651 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.11■□□□□ 0.81
Trav4-4-dv10A0A075B651 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trav4-4-dv10A0A075B651 Zxda-201ENSMUST00000117281 2621 ntBASIC20.1■□□□□ 0.81
Trav4-4-dv10A0A075B651 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav4-4-dv10A0A075B651 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav4-4-dv10A0A075B651 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Trav4-4-dv10A0A075B651 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav4-4-dv10A0A075B651 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav4-4-dv10A0A075B651 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav4-4-dv10A0A075B651 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav4-4-dv10A0A075B651 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav4-4-dv10A0A075B651 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav4-4-dv10A0A075B651 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav4-4-dv10A0A075B651 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trav4-4-dv10A0A075B651 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Trav4-4-dv10A0A075B651 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav4-4-dv10A0A075B651 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trav4-4-dv10A0A075B651 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trav4-4-dv10A0A075B651 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trav4-4-dv10A0A075B651 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav4-4-dv10A0A075B651 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.97■□□□□ 0.79
Trav4-4-dv10A0A075B651 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav4-4-dv10A0A075B651 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trav4-4-dv10A0A075B651 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav4-4-dv10A0A075B651 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
Trav4-4-dv10A0A075B651 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav4-4-dv10A0A075B651 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav4-4-dv10A0A075B651 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav4-4-dv10A0A075B651 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav4-4-dv10A0A075B651 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav4-4-dv10A0A075B651 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav4-4-dv10A0A075B651 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav4-4-dv10A0A075B651 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
Trav4-4-dv10A0A075B651 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav4-4-dv10A0A075B651 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav4-4-dv10A0A075B651 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav4-4-dv10A0A075B651 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav4-4-dv10A0A075B651 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav4-4-dv10A0A075B651 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav4-4-dv10A0A075B651 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav4-4-dv10A0A075B651 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav4-4-dv10A0A075B651 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.81■□□□□ 0.76
Trav4-4-dv10A0A075B651 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav4-4-dv10A0A075B651 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav4-4-dv10A0A075B651 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
Trav4-4-dv10A0A075B651 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav4-4-dv10A0A075B651 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav4-4-dv10A0A075B651 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.77■□□□□ 0.76
Trav4-4-dv10A0A075B651 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trav4-4-dv10A0A075B651 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav4-4-dv10A0A075B651 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav4-4-dv10A0A075B651 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav4-4-dv10A0A075B651 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trav4-4-dv10A0A075B651 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav4-4-dv10A0A075B651 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav4-4-dv10A0A075B651 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav4-4-dv10A0A075B651 Gm25262-201ENSMUST00000174934 133 ntBASIC19.72■□□□□ 0.75
Trav4-4-dv10A0A075B651 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.72■□□□□ 0.75
Trav4-4-dv10A0A075B651 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Trav4-4-dv10A0A075B651 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav4-4-dv10A0A075B651 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav4-4-dv10A0A075B651 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav4-4-dv10A0A075B651 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav4-4-dv10A0A075B651 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav4-4-dv10A0A075B651 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms