Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trav14n-3A0A075B645 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav14n-3A0A075B645 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav14n-3A0A075B645 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav14n-3A0A075B645 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav14n-3A0A075B645 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
Trav14n-3A0A075B645 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav14n-3A0A075B645 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav14n-3A0A075B645 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav14n-3A0A075B645 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.54■□□□□ 0.72
Trav14n-3A0A075B645 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
Trav14n-3A0A075B645 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.54■□□□□ 0.72
Trav14n-3A0A075B645 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav14n-3A0A075B645 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav14n-3A0A075B645 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav14n-3A0A075B645 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav14n-3A0A075B645 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav14n-3A0A075B645 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav14n-3A0A075B645 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav14n-3A0A075B645 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav14n-3A0A075B645 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav14n-3A0A075B645 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trav14n-3A0A075B645 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trav14n-3A0A075B645 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav14n-3A0A075B645 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav14n-3A0A075B645 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.44■□□□□ 0.7
Trav14n-3A0A075B645 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav14n-3A0A075B645 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.43■□□□□ 0.7
Trav14n-3A0A075B645 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav14n-3A0A075B645 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trav14n-3A0A075B645 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav14n-3A0A075B645 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav14n-3A0A075B645 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trav14n-3A0A075B645 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav14n-3A0A075B645 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trav14n-3A0A075B645 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav14n-3A0A075B645 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav14n-3A0A075B645 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav14n-3A0A075B645 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav14n-3A0A075B645 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav14n-3A0A075B645 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav14n-3A0A075B645 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav14n-3A0A075B645 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav14n-3A0A075B645 Amer2-203ENSMUST00000225247 2662 ntBASIC19.32■□□□□ 0.68
Trav14n-3A0A075B645 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav14n-3A0A075B645 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Trav14n-3A0A075B645 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav14n-3A0A075B645 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav14n-3A0A075B645 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav14n-3A0A075B645 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav14n-3A0A075B645 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav14n-3A0A075B645 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Trav14n-3A0A075B645 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav14n-3A0A075B645 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trav14n-3A0A075B645 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Trav14n-3A0A075B645 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.26■□□□□ 0.67
Trav14n-3A0A075B645 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.25■□□□□ 0.67
Trav14n-3A0A075B645 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav14n-3A0A075B645 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trav14n-3A0A075B645 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav14n-3A0A075B645 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav14n-3A0A075B645 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.2■□□□□ 0.66
Trav14n-3A0A075B645 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav14n-3A0A075B645 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trav14n-3A0A075B645 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav14n-3A0A075B645 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.18■□□□□ 0.66
Trav14n-3A0A075B645 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trav14n-3A0A075B645 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav14n-3A0A075B645 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.17■□□□□ 0.66
Trav14n-3A0A075B645 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav14n-3A0A075B645 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav14n-3A0A075B645 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav14n-3A0A075B645 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trav14n-3A0A075B645 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav14n-3A0A075B645 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.13■□□□□ 0.65
Trav14n-3A0A075B645 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav14n-3A0A075B645 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav14n-3A0A075B645 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav14n-3A0A075B645 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav14n-3A0A075B645 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav14n-3A0A075B645 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav14n-3A0A075B645 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav14n-3A0A075B645 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav14n-3A0A075B645 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trav14n-3A0A075B645 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav14n-3A0A075B645 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav14n-3A0A075B645 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.08■□□□□ 0.64
Trav14n-3A0A075B645 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav14n-3A0A075B645 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav14n-3A0A075B645 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav14n-3A0A075B645 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trav14n-3A0A075B645 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav14n-3A0A075B645 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.05■□□□□ 0.64
Trav14n-3A0A075B645 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav14n-3A0A075B645 Gm25238-201ENSMUST00000174914 89 ntBASIC19.03■□□□□ 0.64
Trav14n-3A0A075B645 Mipep-204ENSMUST00000225043 1548 ntBASIC19.03■□□□□ 0.64
Trav14n-3A0A075B645 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav14n-3A0A075B645 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trav14n-3A0A075B645 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav14n-3A0A075B645 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms