Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trav6-7-dv9A0A075B639 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Trav6-7-dv9A0A075B639 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trav6-7-dv9A0A075B639 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Trav6-7-dv9A0A075B639 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trav6-7-dv9A0A075B639 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.14■■□□□ 1.29
Trav6-7-dv9A0A075B639 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trav6-7-dv9A0A075B639 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Trav6-7-dv9A0A075B639 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.13■■□□□ 1.29
Trav6-7-dv9A0A075B639 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
Trav6-7-dv9A0A075B639 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trav6-7-dv9A0A075B639 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trav6-7-dv9A0A075B639 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trav6-7-dv9A0A075B639 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trav6-7-dv9A0A075B639 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trav6-7-dv9A0A075B639 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trav6-7-dv9A0A075B639 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trav6-7-dv9A0A075B639 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trav6-7-dv9A0A075B639 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Trav6-7-dv9A0A075B639 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
Trav6-7-dv9A0A075B639 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Trav6-7-dv9A0A075B639 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trav6-7-dv9A0A075B639 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trav6-7-dv9A0A075B639 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.94■■□□□ 1.26
Trav6-7-dv9A0A075B639 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trav6-7-dv9A0A075B639 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trav6-7-dv9A0A075B639 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trav6-7-dv9A0A075B639 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trav6-7-dv9A0A075B639 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trav6-7-dv9A0A075B639 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.92■■□□□ 1.26
Trav6-7-dv9A0A075B639 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trav6-7-dv9A0A075B639 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trav6-7-dv9A0A075B639 Gm26115-201ENSMUST00000175605 87 ntBASIC22.91■■□□□ 1.26
Trav6-7-dv9A0A075B639 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.91■■□□□ 1.26
Trav6-7-dv9A0A075B639 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trav6-7-dv9A0A075B639 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trav6-7-dv9A0A075B639 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Trav6-7-dv9A0A075B639 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Trav6-7-dv9A0A075B639 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Trav6-7-dv9A0A075B639 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trav6-7-dv9A0A075B639 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.87■■□□□ 1.25
Trav6-7-dv9A0A075B639 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Trav6-7-dv9A0A075B639 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trav6-7-dv9A0A075B639 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trav6-7-dv9A0A075B639 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trav6-7-dv9A0A075B639 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trav6-7-dv9A0A075B639 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trav6-7-dv9A0A075B639 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Trav6-7-dv9A0A075B639 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trav6-7-dv9A0A075B639 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trav6-7-dv9A0A075B639 Gm8109-201ENSMUST00000194076 746 ntBASIC22.81■■□□□ 1.24
Trav6-7-dv9A0A075B639 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Trav6-7-dv9A0A075B639 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trav6-7-dv9A0A075B639 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Trav6-7-dv9A0A075B639 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Trav6-7-dv9A0A075B639 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Trav6-7-dv9A0A075B639 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trav6-7-dv9A0A075B639 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.73■■□□□ 1.23
Trav6-7-dv9A0A075B639 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trav6-7-dv9A0A075B639 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.73■■□□□ 1.23
Trav6-7-dv9A0A075B639 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trav6-7-dv9A0A075B639 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trav6-7-dv9A0A075B639 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trav6-7-dv9A0A075B639 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Trav6-7-dv9A0A075B639 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trav6-7-dv9A0A075B639 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trav6-7-dv9A0A075B639 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trav6-7-dv9A0A075B639 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trav6-7-dv9A0A075B639 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trav6-7-dv9A0A075B639 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Trav6-7-dv9A0A075B639 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trav6-7-dv9A0A075B639 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trav6-7-dv9A0A075B639 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trav6-7-dv9A0A075B639 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.59■■□□□ 1.21
Trav6-7-dv9A0A075B639 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trav6-7-dv9A0A075B639 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trav6-7-dv9A0A075B639 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
Trav6-7-dv9A0A075B639 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Trav6-7-dv9A0A075B639 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
Trav6-7-dv9A0A075B639 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trav6-7-dv9A0A075B639 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trav6-7-dv9A0A075B639 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Trav6-7-dv9A0A075B639 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trav6-7-dv9A0A075B639 Peli2-204ENSMUST00000226513 1320 ntBASIC22.56■■□□□ 1.2
Trav6-7-dv9A0A075B639 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.55■■□□□ 1.2
Trav6-7-dv9A0A075B639 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.55■■□□□ 1.2
Trav6-7-dv9A0A075B639 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trav6-7-dv9A0A075B639 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trav6-7-dv9A0A075B639 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Trav6-7-dv9A0A075B639 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trav6-7-dv9A0A075B639 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trav6-7-dv9A0A075B639 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trav6-7-dv9A0A075B639 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trav6-7-dv9A0A075B639 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.51■■□□□ 1.19
Trav6-7-dv9A0A075B639 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trav6-7-dv9A0A075B639 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trav6-7-dv9A0A075B639 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trav6-7-dv9A0A075B639 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Trav6-7-dv9A0A075B639 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trav6-7-dv9A0A075B639 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms