Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ighv1-54A0A075B5W5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ighv1-54A0A075B5W5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ighv1-54A0A075B5W5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ighv1-54A0A075B5W5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Ighv1-54A0A075B5W5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ighv1-54A0A075B5W5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ighv1-54A0A075B5W5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ighv1-54A0A075B5W5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ighv1-54A0A075B5W5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ighv1-54A0A075B5W5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ighv1-54A0A075B5W5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ighv1-54A0A075B5W5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ighv1-54A0A075B5W5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ighv1-54A0A075B5W5 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.46■■□□□ 1.35
Ighv1-54A0A075B5W5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.42■■□□□ 1.34
Ighv1-54A0A075B5W5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ighv1-54A0A075B5W5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ighv1-54A0A075B5W5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ighv1-54A0A075B5W5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ighv1-54A0A075B5W5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ighv1-54A0A075B5W5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ighv1-54A0A075B5W5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ighv1-54A0A075B5W5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ighv1-54A0A075B5W5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ighv1-54A0A075B5W5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ighv1-54A0A075B5W5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
Ighv1-54A0A075B5W5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.35■■□□□ 1.33
Ighv1-54A0A075B5W5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ighv1-54A0A075B5W5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ighv1-54A0A075B5W5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ighv1-54A0A075B5W5 Gm24804-201ENSMUST00000174982 85 ntBASIC23.3■■□□□ 1.32
Ighv1-54A0A075B5W5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Ighv1-54A0A075B5W5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ighv1-54A0A075B5W5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ighv1-54A0A075B5W5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ighv1-54A0A075B5W5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ighv1-54A0A075B5W5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ighv1-54A0A075B5W5 Peli2-204ENSMUST00000226513 1320 ntBASIC23.27■■□□□ 1.32
Ighv1-54A0A075B5W5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ighv1-54A0A075B5W5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ighv1-54A0A075B5W5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ighv1-54A0A075B5W5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ighv1-54A0A075B5W5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ighv1-54A0A075B5W5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Ighv1-54A0A075B5W5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ighv1-54A0A075B5W5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.2■■□□□ 1.3
Ighv1-54A0A075B5W5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.19■■□□□ 1.3
Ighv1-54A0A075B5W5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Ighv1-54A0A075B5W5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ighv1-54A0A075B5W5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ighv1-54A0A075B5W5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Ighv1-54A0A075B5W5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ighv1-54A0A075B5W5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ighv1-54A0A075B5W5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ighv1-54A0A075B5W5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ighv1-54A0A075B5W5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ighv1-54A0A075B5W5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Ighv1-54A0A075B5W5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ighv1-54A0A075B5W5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ighv1-54A0A075B5W5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ighv1-54A0A075B5W5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.06■■□□□ 1.28
Ighv1-54A0A075B5W5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.06■■□□□ 1.28
Ighv1-54A0A075B5W5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.05■■□□□ 1.28
Ighv1-54A0A075B5W5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
Ighv1-54A0A075B5W5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ighv1-54A0A075B5W5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ighv1-54A0A075B5W5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ighv1-54A0A075B5W5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ighv1-54A0A075B5W5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ighv1-54A0A075B5W5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ighv1-54A0A075B5W5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Ighv1-54A0A075B5W5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Ighv1-54A0A075B5W5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ighv1-54A0A075B5W5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
Ighv1-54A0A075B5W5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ighv1-54A0A075B5W5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ighv1-54A0A075B5W5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ighv1-54A0A075B5W5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ighv1-54A0A075B5W5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
Ighv1-54A0A075B5W5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ighv1-54A0A075B5W5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ighv1-54A0A075B5W5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ighv1-54A0A075B5W5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Ighv1-54A0A075B5W5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ighv1-54A0A075B5W5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ighv1-54A0A075B5W5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ighv1-54A0A075B5W5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.95■■□□□ 1.26
Ighv1-54A0A075B5W5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ighv1-54A0A075B5W5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.94■■□□□ 1.26
Ighv1-54A0A075B5W5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ighv1-54A0A075B5W5 Gm16148-201ENSMUST00000119653 893 ntBASIC22.93■■□□□ 1.26
Ighv1-54A0A075B5W5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ighv1-54A0A075B5W5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ighv1-54A0A075B5W5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.91■■□□□ 1.26
Ighv1-54A0A075B5W5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ighv1-54A0A075B5W5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ighv1-54A0A075B5W5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.91■■□□□ 1.26
Ighv1-54A0A075B5W5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ighv1-54A0A075B5W5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms