Protein–RNA interactions for Protein: A0A075B5S6

Ighv3-1, Immunoglobulin heavy variable 3-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-1A0A075B5S6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv3-1A0A075B5S6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv3-1A0A075B5S6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ighv3-1A0A075B5S6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ighv3-1A0A075B5S6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.99■□□□□ 0.95
Ighv3-1A0A075B5S6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv3-1A0A075B5S6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv3-1A0A075B5S6 Mipep-204ENSMUST00000225043 1548 ntBASIC20.96■□□□□ 0.95
Ighv3-1A0A075B5S6 Gm16148-201ENSMUST00000119653 893 ntBASIC20.96■□□□□ 0.95
Ighv3-1A0A075B5S6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ighv3-1A0A075B5S6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv3-1A0A075B5S6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv3-1A0A075B5S6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv3-1A0A075B5S6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv3-1A0A075B5S6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv3-1A0A075B5S6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv3-1A0A075B5S6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv3-1A0A075B5S6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv3-1A0A075B5S6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ighv3-1A0A075B5S6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv3-1A0A075B5S6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv3-1A0A075B5S6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv3-1A0A075B5S6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ighv3-1A0A075B5S6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv3-1A0A075B5S6 Peli2-204ENSMUST00000226513 1320 ntBASIC20.81■□□□□ 0.92
Ighv3-1A0A075B5S6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv3-1A0A075B5S6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.81■□□□□ 0.92
Ighv3-1A0A075B5S6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv3-1A0A075B5S6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv3-1A0A075B5S6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv3-1A0A075B5S6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ighv3-1A0A075B5S6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.79■□□□□ 0.92
Ighv3-1A0A075B5S6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ighv3-1A0A075B5S6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.79■□□□□ 0.92
Ighv3-1A0A075B5S6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv3-1A0A075B5S6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv3-1A0A075B5S6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv3-1A0A075B5S6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.77■□□□□ 0.92
Ighv3-1A0A075B5S6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ighv3-1A0A075B5S6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Ighv3-1A0A075B5S6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv3-1A0A075B5S6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv3-1A0A075B5S6 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.74■□□□□ 0.91
Ighv3-1A0A075B5S6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv3-1A0A075B5S6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.72■□□□□ 0.91
Ighv3-1A0A075B5S6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ighv3-1A0A075B5S6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv3-1A0A075B5S6 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.7■□□□□ 0.9
Ighv3-1A0A075B5S6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.67■□□□□ 0.9
Ighv3-1A0A075B5S6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ighv3-1A0A075B5S6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ighv3-1A0A075B5S6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv3-1A0A075B5S6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv3-1A0A075B5S6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.64■□□□□ 0.89
Ighv3-1A0A075B5S6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ighv3-1A0A075B5S6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv3-1A0A075B5S6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv3-1A0A075B5S6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv3-1A0A075B5S6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv3-1A0A075B5S6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv3-1A0A075B5S6 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.57■□□□□ 0.88
Ighv3-1A0A075B5S6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.57■□□□□ 0.88
Ighv3-1A0A075B5S6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.57■□□□□ 0.88
Ighv3-1A0A075B5S6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv3-1A0A075B5S6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv3-1A0A075B5S6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Ighv3-1A0A075B5S6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv3-1A0A075B5S6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.55■□□□□ 0.88
Ighv3-1A0A075B5S6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv3-1A0A075B5S6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv3-1A0A075B5S6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv3-1A0A075B5S6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.53■□□□□ 0.88
Ighv3-1A0A075B5S6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv3-1A0A075B5S6 Gm45855-201ENSMUST00000212546 880 ntBASIC20.49■□□□□ 0.87
Ighv3-1A0A075B5S6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv3-1A0A075B5S6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv3-1A0A075B5S6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv3-1A0A075B5S6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv3-1A0A075B5S6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv3-1A0A075B5S6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.47■□□□□ 0.87
Ighv3-1A0A075B5S6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv3-1A0A075B5S6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ighv3-1A0A075B5S6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv3-1A0A075B5S6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv3-1A0A075B5S6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ighv3-1A0A075B5S6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv3-1A0A075B5S6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ighv3-1A0A075B5S6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.39■□□□□ 0.86
Ighv3-1A0A075B5S6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ighv3-1A0A075B5S6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ighv3-1A0A075B5S6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv3-1A0A075B5S6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv3-1A0A075B5S6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.36■□□□□ 0.85
Ighv3-1A0A075B5S6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ighv3-1A0A075B5S6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv3-1A0A075B5S6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv3-1A0A075B5S6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv3-1A0A075B5S6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv3-1A0A075B5S6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv3-1A0A075B5S6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms