Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trim60Q8VI40 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim60Q8VI40 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim60Q8VI40 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim60Q8VI40 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim60Q8VI40 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim60Q8VI40 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim60Q8VI40 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim60Q8VI40 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim60Q8VI40 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim60Q8VI40 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
Trim60Q8VI40 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim60Q8VI40 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim60Q8VI40 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim60Q8VI40 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim60Q8VI40 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim60Q8VI40 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim60Q8VI40 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim60Q8VI40 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Trim60Q8VI40 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim60Q8VI40 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim60Q8VI40 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim60Q8VI40 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim60Q8VI40 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.78■□□□□ 0.92
Trim60Q8VI40 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim60Q8VI40 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim60Q8VI40 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.78■□□□□ 0.92
Trim60Q8VI40 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim60Q8VI40 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Trim60Q8VI40 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Trim60Q8VI40 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim60Q8VI40 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Trim60Q8VI40 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Trim60Q8VI40 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim60Q8VI40 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim60Q8VI40 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.77■□□□□ 0.92
Trim60Q8VI40 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim60Q8VI40 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim60Q8VI40 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Trim60Q8VI40 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim60Q8VI40 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim60Q8VI40 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim60Q8VI40 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim60Q8VI40 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim60Q8VI40 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.76■□□□□ 0.91
Trim60Q8VI40 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim60Q8VI40 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim60Q8VI40 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim60Q8VI40 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim60Q8VI40 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim60Q8VI40 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim60Q8VI40 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.75■□□□□ 0.91
Trim60Q8VI40 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim60Q8VI40 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim60Q8VI40 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim60Q8VI40 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim60Q8VI40 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim60Q8VI40 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim60Q8VI40 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim60Q8VI40 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim60Q8VI40 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim60Q8VI40 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim60Q8VI40 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim60Q8VI40 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Trim60Q8VI40 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Trim60Q8VI40 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim60Q8VI40 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim60Q8VI40 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim60Q8VI40 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim60Q8VI40 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim60Q8VI40 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim60Q8VI40 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
Trim60Q8VI40 Gm7143-201ENSMUST00000222811 859 ntBASIC20.73■□□□□ 0.91
Trim60Q8VI40 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim60Q8VI40 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim60Q8VI40 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim60Q8VI40 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim60Q8VI40 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim60Q8VI40 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim60Q8VI40 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim60Q8VI40 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim60Q8VI40 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim60Q8VI40 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim60Q8VI40 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim60Q8VI40 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim60Q8VI40 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim60Q8VI40 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim60Q8VI40 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim60Q8VI40 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim60Q8VI40 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim60Q8VI40 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim60Q8VI40 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim60Q8VI40 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim60Q8VI40 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim60Q8VI40 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim60Q8VI40 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim60Q8VI40 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim60Q8VI40 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim60Q8VI40 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim60Q8VI40 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms