Protein–RNA interactions for Protein: Q8VBS7

Vmn1r42, Vomeronasal type-1 receptor 42, mousemouse

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r42Q8VBS7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r42Q8VBS7 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.23■□□□□ 0.51
Vmn1r42Q8VBS7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r42Q8VBS7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r42Q8VBS7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r42Q8VBS7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r42Q8VBS7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.21■□□□□ 0.51
Vmn1r42Q8VBS7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r42Q8VBS7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r42Q8VBS7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r42Q8VBS7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r42Q8VBS7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r42Q8VBS7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r42Q8VBS7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Gm9847-201ENSMUST00000052528 599 ntBASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r42Q8VBS7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r42Q8VBS7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r42Q8VBS7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Vmn1r42Q8VBS7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.19■□□□□ 0.5
Vmn1r42Q8VBS7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r42Q8VBS7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.19■□□□□ 0.5
Vmn1r42Q8VBS7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.19■□□□□ 0.5
Vmn1r42Q8VBS7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r42Q8VBS7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r42Q8VBS7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r42Q8VBS7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 Gm13241-201ENSMUST00000094493 780 ntBASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r42Q8VBS7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Gm12922-201ENSMUST00000120626 809 ntBASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r42Q8VBS7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.16■□□□□ 0.5
Vmn1r42Q8VBS7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r42Q8VBS7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r42Q8VBS7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.15■□□□□ 0.5
Vmn1r42Q8VBS7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r42Q8VBS7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r42Q8VBS7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.15■□□□□ 0.5
Vmn1r42Q8VBS7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Vmn1r42Q8VBS7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Vmn1r42Q8VBS7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vmn1r42Q8VBS7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms