Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pif1Q80SX8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pif1Q80SX8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pif1Q80SX8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pif1Q80SX8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pif1Q80SX8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pif1Q80SX8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pif1Q80SX8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pif1Q80SX8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.52■□□□□ 0.56
Pif1Q80SX8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Pif1Q80SX8 Gm7291-201ENSMUST00000199147 382 ntBASIC18.52■□□□□ 0.56
Pif1Q80SX8 Gm40848-201ENSMUST00000221998 324 ntBASIC18.52■□□□□ 0.56
Pif1Q80SX8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pif1Q80SX8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pif1Q80SX8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pif1Q80SX8 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.52■□□□□ 0.55
Pif1Q80SX8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Pif1Q80SX8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pif1Q80SX8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pif1Q80SX8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pif1Q80SX8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.51■□□□□ 0.55
Pif1Q80SX8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pif1Q80SX8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Pif1Q80SX8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pif1Q80SX8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pif1Q80SX8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pif1Q80SX8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pif1Q80SX8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.5■□□□□ 0.55
Pif1Q80SX8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pif1Q80SX8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pif1Q80SX8 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.5■□□□□ 0.55
Pif1Q80SX8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Pif1Q80SX8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pif1Q80SX8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pif1Q80SX8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.5■□□□□ 0.55
Pif1Q80SX8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.5■□□□□ 0.55
Pif1Q80SX8 Gm42569-201ENSMUST00000200539 472 ntBASIC18.5■□□□□ 0.55
Pif1Q80SX8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pif1Q80SX8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pif1Q80SX8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pif1Q80SX8 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.5■□□□□ 0.55
Pif1Q80SX8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pif1Q80SX8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pif1Q80SX8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pif1Q80SX8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pif1Q80SX8 Gm42642-201ENSMUST00000200683 355 ntBASIC18.49■□□□□ 0.55
Pif1Q80SX8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.49■□□□□ 0.55
Pif1Q80SX8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pif1Q80SX8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pif1Q80SX8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pif1Q80SX8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pif1Q80SX8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pif1Q80SX8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Pif1Q80SX8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pif1Q80SX8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.48■□□□□ 0.55
Pif1Q80SX8 Gm26571-201ENSMUST00000181399 666 ntBASIC18.48■□□□□ 0.55
Pif1Q80SX8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pif1Q80SX8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.48■□□□□ 0.55
Pif1Q80SX8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Smad6-203ENSMUST00000179458 273 ntBASIC18.47■□□□□ 0.55
Pif1Q80SX8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.47■□□□□ 0.55
Pif1Q80SX8 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.47■□□□□ 0.55
Pif1Q80SX8 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.47■□□□□ 0.55
Pif1Q80SX8 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.47■□□□□ 0.55
Pif1Q80SX8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.47■□□□□ 0.55
Pif1Q80SX8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pif1Q80SX8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.46■□□□□ 0.55
Pif1Q80SX8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pif1Q80SX8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms