Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Clns1aQ61189 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.16■□□□□ 0.34
Clns1aQ61189 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clns1aQ61189 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clns1aQ61189 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clns1aQ61189 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.16■□□□□ 0.34
Clns1aQ61189 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clns1aQ61189 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clns1aQ61189 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clns1aQ61189 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clns1aQ61189 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Clns1aQ61189 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clns1aQ61189 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clns1aQ61189 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.15■□□□□ 0.34
Clns1aQ61189 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Clns1aQ61189 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clns1aQ61189 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clns1aQ61189 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Clns1aQ61189 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clns1aQ61189 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.15■□□□□ 0.34
Clns1aQ61189 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clns1aQ61189 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.15■□□□□ 0.34
Clns1aQ61189 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clns1aQ61189 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clns1aQ61189 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clns1aQ61189 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clns1aQ61189 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clns1aQ61189 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clns1aQ61189 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clns1aQ61189 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clns1aQ61189 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Clns1aQ61189 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clns1aQ61189 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clns1aQ61189 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clns1aQ61189 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Clns1aQ61189 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clns1aQ61189 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.13■□□□□ 0.33
Clns1aQ61189 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clns1aQ61189 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clns1aQ61189 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.13■□□□□ 0.33
Clns1aQ61189 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.13■□□□□ 0.33
Clns1aQ61189 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clns1aQ61189 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clns1aQ61189 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clns1aQ61189 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clns1aQ61189 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clns1aQ61189 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clns1aQ61189 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clns1aQ61189 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.12■□□□□ 0.33
Clns1aQ61189 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.12■□□□□ 0.33
Clns1aQ61189 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clns1aQ61189 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clns1aQ61189 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clns1aQ61189 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Clns1aQ61189 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clns1aQ61189 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clns1aQ61189 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clns1aQ61189 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Clns1aQ61189 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Clns1aQ61189 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.11■□□□□ 0.33
Clns1aQ61189 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clns1aQ61189 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clns1aQ61189 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clns1aQ61189 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clns1aQ61189 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clns1aQ61189 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Clns1aQ61189 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clns1aQ61189 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clns1aQ61189 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.1■□□□□ 0.33
Clns1aQ61189 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clns1aQ61189 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.1■□□□□ 0.33
Clns1aQ61189 Gm11687-201ENSMUST00000118911 886 ntBASIC17.1■□□□□ 0.33
Clns1aQ61189 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clns1aQ61189 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clns1aQ61189 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clns1aQ61189 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clns1aQ61189 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.09■□□□□ 0.33
Clns1aQ61189 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clns1aQ61189 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clns1aQ61189 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clns1aQ61189 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clns1aQ61189 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clns1aQ61189 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clns1aQ61189 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clns1aQ61189 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clns1aQ61189 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clns1aQ61189 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clns1aQ61189 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clns1aQ61189 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clns1aQ61189 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms