Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 Gm13238-201ENSMUST00000117655 780 ntBASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav7d-3Q5R1I1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav7d-3Q5R1I1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav7d-3Q5R1I1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.71□□□□□ -0.06
Trav7d-3Q5R1I1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-3Q5R1I1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-3Q5R1I1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Trav7d-3Q5R1I1 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.7□□□□□ -0.06
Trav7d-3Q5R1I1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-3Q5R1I1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav7d-3Q5R1I1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav7d-3Q5R1I1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav7d-3Q5R1I1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav7d-3Q5R1I1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7d-3Q5R1I1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav7d-3Q5R1I1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7d-3Q5R1I1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms