Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Sox2P48432 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox2P48432 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox2P48432 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox2P48432 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sox2P48432 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.83■□□□□ 0.6
Sox2P48432 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.83■□□□□ 0.6
Sox2P48432 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sox2P48432 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sox2P48432 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sox2P48432 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox2P48432 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sox2P48432 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Sox2P48432 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox2P48432 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox2P48432 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox2P48432 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sox2P48432 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox2P48432 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox2P48432 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox2P48432 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.82■□□□□ 0.6
Sox2P48432 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox2P48432 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox2P48432 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Sox2P48432 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.81■□□□□ 0.6
Sox2P48432 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.81■□□□□ 0.6
Sox2P48432 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sox2P48432 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox2P48432 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox2P48432 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox2P48432 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox2P48432 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox2P48432 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox2P48432 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox2P48432 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox2P48432 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox2P48432 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.8■□□□□ 0.6
Sox2P48432 Gm12366-201ENSMUST00000121722 873 ntBASIC18.8■□□□□ 0.6
Sox2P48432 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.8■□□□□ 0.6
Sox2P48432 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox2P48432 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox2P48432 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox2P48432 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox2P48432 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.8■□□□□ 0.6
Sox2P48432 Gm5786-201ENSMUST00000085368 882 ntBASIC18.8■□□□□ 0.6
Sox2P48432 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox2P48432 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sox2P48432 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.79■□□□□ 0.6
Sox2P48432 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox2P48432 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox2P48432 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox2P48432 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox2P48432 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox2P48432 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sox2P48432 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox2P48432 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox2P48432 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox2P48432 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.78■□□□□ 0.6
Sox2P48432 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox2P48432 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox2P48432 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox2P48432 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Sox2P48432 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox2P48432 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox2P48432 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox2P48432 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox2P48432 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox2P48432 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox2P48432 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox2P48432 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox2P48432 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.77■□□□□ 0.6
Sox2P48432 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox2P48432 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.77■□□□□ 0.6
Sox2P48432 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox2P48432 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sox2P48432 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
Sox2P48432 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sox2P48432 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox2P48432 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sox2P48432 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox2P48432 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox2P48432 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox2P48432 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox2P48432 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox2P48432 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sox2P48432 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox2P48432 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sox2P48432 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.75■□□□□ 0.59
Sox2P48432 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Sox2P48432 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox2P48432 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox2P48432 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox2P48432 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox2P48432 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox2P48432 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox2P48432 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox2P48432 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox2P48432 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox2P48432 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox2P48432 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms