Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TfamP40630 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TfamP40630 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TfamP40630 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TfamP40630 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TfamP40630 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TfamP40630 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TfamP40630 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TfamP40630 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TfamP40630 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TfamP40630 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TfamP40630 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TfamP40630 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TfamP40630 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.47■□□□□ 0.71
TfamP40630 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.47■□□□□ 0.71
TfamP40630 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.47■□□□□ 0.71
TfamP40630 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.47■□□□□ 0.71
TfamP40630 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.47■□□□□ 0.71
TfamP40630 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TfamP40630 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TfamP40630 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TfamP40630 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TfamP40630 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TfamP40630 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.46■□□□□ 0.71
TfamP40630 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TfamP40630 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.46■□□□□ 0.71
TfamP40630 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TfamP40630 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.46■□□□□ 0.71
TfamP40630 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.46■□□□□ 0.71
TfamP40630 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TfamP40630 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TfamP40630 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TfamP40630 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TfamP40630 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TfamP40630 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TfamP40630 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TfamP40630 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.45■□□□□ 0.7
TfamP40630 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.45■□□□□ 0.7
TfamP40630 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.45■□□□□ 0.7
TfamP40630 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TfamP40630 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TfamP40630 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.45■□□□□ 0.7
TfamP40630 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TfamP40630 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TfamP40630 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TfamP40630 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TfamP40630 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TfamP40630 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TfamP40630 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.44■□□□□ 0.7
TfamP40630 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
TfamP40630 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TfamP40630 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TfamP40630 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TfamP40630 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TfamP40630 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TfamP40630 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TfamP40630 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TfamP40630 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TfamP40630 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
TfamP40630 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TfamP40630 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TfamP40630 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.42■□□□□ 0.7
TfamP40630 Gm40881-201ENSMUST00000223397 166 ntBASIC19.42■□□□□ 0.7
TfamP40630 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TfamP40630 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TfamP40630 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TfamP40630 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TfamP40630 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TfamP40630 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TfamP40630 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TfamP40630 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TfamP40630 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TfamP40630 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TfamP40630 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.41■□□□□ 0.7
TfamP40630 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.41■□□□□ 0.7
TfamP40630 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TfamP40630 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TfamP40630 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TfamP40630 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TfamP40630 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.4■□□□□ 0.7
TfamP40630 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.4■□□□□ 0.7
TfamP40630 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TfamP40630 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TfamP40630 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TfamP40630 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TfamP40630 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TfamP40630 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TfamP40630 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TfamP40630 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TfamP40630 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TfamP40630 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TfamP40630 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TfamP40630 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TfamP40630 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
TfamP40630 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.38■□□□□ 0.69
TfamP40630 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.38■□□□□ 0.69
TfamP40630 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TfamP40630 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TfamP40630 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TfamP40630 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms