Protein–RNA interactions for Protein: P28705

Rxrg, Retinoic acid receptor RXR-gamma, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrgP28705 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RxrgP28705 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RxrgP28705 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RxrgP28705 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.09■□□□□ 0.81
RxrgP28705 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RxrgP28705 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.08■□□□□ 0.81
RxrgP28705 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.08■□□□□ 0.81
RxrgP28705 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RxrgP28705 Mir7075-201ENSMUST00000184187 82 ntBASIC20.08■□□□□ 0.81
RxrgP28705 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RxrgP28705 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
RxrgP28705 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RxrgP28705 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RxrgP28705 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.07■□□□□ 0.8
RxrgP28705 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RxrgP28705 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RxrgP28705 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.07■□□□□ 0.8
RxrgP28705 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.07■□□□□ 0.8
RxrgP28705 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.07■□□□□ 0.8
RxrgP28705 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RxrgP28705 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RxrgP28705 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RxrgP28705 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RxrgP28705 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RxrgP28705 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RxrgP28705 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RxrgP28705 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RxrgP28705 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RxrgP28705 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RxrgP28705 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RxrgP28705 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrgP28705 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrgP28705 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.05■□□□□ 0.8
RxrgP28705 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RxrgP28705 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrgP28705 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.05■□□□□ 0.8
RxrgP28705 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.05■□□□□ 0.8
RxrgP28705 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrgP28705 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RxrgP28705 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrgP28705 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RxrgP28705 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RxrgP28705 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrgP28705 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RxrgP28705 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrgP28705 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RxrgP28705 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrgP28705 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RxrgP28705 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RxrgP28705 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RxrgP28705 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RxrgP28705 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RxrgP28705 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.04■□□□□ 0.8
RxrgP28705 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RxrgP28705 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RxrgP28705 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RxrgP28705 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RxrgP28705 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.04■□□□□ 0.8
RxrgP28705 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
RxrgP28705 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RxrgP28705 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
RxrgP28705 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RxrgP28705 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RxrgP28705 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RxrgP28705 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RxrgP28705 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RxrgP28705 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.03■□□□□ 0.8
RxrgP28705 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RxrgP28705 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
RxrgP28705 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RxrgP28705 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RxrgP28705 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.03■□□□□ 0.8
RxrgP28705 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RxrgP28705 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RxrgP28705 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RxrgP28705 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RxrgP28705 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RxrgP28705 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RxrgP28705 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RxrgP28705 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RxrgP28705 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RxrgP28705 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RxrgP28705 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.02■□□□□ 0.8
RxrgP28705 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RxrgP28705 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RxrgP28705 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RxrgP28705 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrgP28705 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrgP28705 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.01■□□□□ 0.79
RxrgP28705 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.01■□□□□ 0.79
RxrgP28705 Gm8493-201ENSMUST00000196881 489 ntBASIC20.01■□□□□ 0.79
RxrgP28705 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.01■□□□□ 0.79
RxrgP28705 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrgP28705 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.01■□□□□ 0.79
RxrgP28705 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrgP28705 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrgP28705 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RxrgP28705 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrgP28705 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrgP28705 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms