Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm42642-201ENSMUST00000200683 355 ntBASIC21.06■□□□□ 0.96
Hoxd8P23463 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.06■□□□□ 0.96
Hoxd8P23463 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.06■□□□□ 0.96
Hoxd8P23463 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxd8P23463 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxd8P23463 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxd8P23463 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxd8P23463 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Hoxd8P23463 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxd8P23463 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxd8P23463 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxd8P23463 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxd8P23463 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxd8P23463 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxd8P23463 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxd8P23463 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxd8P23463 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxd8P23463 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Hoxd8P23463 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxd8P23463 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxd8P23463 Gm27405-201ENSMUST00000184201 112 ntBASIC21.03■□□□□ 0.96
Hoxd8P23463 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxd8P23463 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxd8P23463 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Hoxd8P23463 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxd8P23463 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxd8P23463 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxd8P23463 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.02■□□□□ 0.96
Hoxd8P23463 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.02■□□□□ 0.96
Hoxd8P23463 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.02■□□□□ 0.96
Hoxd8P23463 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxd8P23463 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxd8P23463 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Hoxd8P23463 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.02■□□□□ 0.95
Hoxd8P23463 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Hoxd8P23463 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.01■□□□□ 0.95
Hoxd8P23463 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxd8P23463 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxd8P23463 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21■□□□□ 0.95
Hoxd8P23463 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hoxd8P23463 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21■□□□□ 0.95
Hoxd8P23463 Gm10033-202ENSMUST00000211874 928 ntBASIC21■□□□□ 0.95
Hoxd8P23463 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxd8P23463 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Hoxd8P23463 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxd8P23463 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxd8P23463 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxd8P23463 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxd8P23463 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Hoxd8P23463 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxd8P23463 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxd8P23463 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxd8P23463 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxd8P23463 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Hoxd8P23463 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxd8P23463 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.98■□□□□ 0.95
Hoxd8P23463 Gm42569-201ENSMUST00000200539 472 ntBASIC20.98■□□□□ 0.95
Hoxd8P23463 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.98■□□□□ 0.95
Hoxd8P23463 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxd8P23463 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxd8P23463 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.98■□□□□ 0.95
Hoxd8P23463 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Hoxd8P23463 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxd8P23463 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxd8P23463 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxd8P23463 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxd8P23463 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Hoxd8P23463 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxd8P23463 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxd8P23463 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxd8P23463 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxd8P23463 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxd8P23463 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxd8P23463 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxd8P23463 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxd8P23463 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxd8P23463 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxd8P23463 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxd8P23463 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Hoxd8P23463 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxd8P23463 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxd8P23463 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxd8P23463 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxd8P23463 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxd8P23463 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxd8P23463 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxd8P23463 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.94■□□□□ 0.94
Hoxd8P23463 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxd8P23463 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hoxd8P23463 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxd8P23463 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxd8P23463 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.93■□□□□ 0.94
Hoxd8P23463 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.93■□□□□ 0.94
Hoxd8P23463 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxd8P23463 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxd8P23463 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxd8P23463 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Hoxd8P23463 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxd8P23463 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxd8P23463 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms