Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd74P04441 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd74P04441 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd74P04441 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd74P04441 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd74P04441 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd74P04441 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd74P04441 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.75■□□□□ 0.27
Cd74P04441 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cd74P04441 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.75■□□□□ 0.27
Cd74P04441 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd74P04441 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd74P04441 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cd74P04441 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd74P04441 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd74P04441 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.75■□□□□ 0.27
Cd74P04441 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd74P04441 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cd74P04441 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd74P04441 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd74P04441 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd74P04441 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd74P04441 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.74■□□□□ 0.27
Cd74P04441 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cd74P04441 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.74■□□□□ 0.27
Cd74P04441 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
Cd74P04441 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.74■□□□□ 0.27
Cd74P04441 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd74P04441 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cd74P04441 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cd74P04441 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cd74P04441 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd74P04441 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd74P04441 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd74P04441 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd74P04441 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.73■□□□□ 0.27
Cd74P04441 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.73■□□□□ 0.27
Cd74P04441 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd74P04441 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd74P04441 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.73■□□□□ 0.27
Cd74P04441 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.73■□□□□ 0.27
Cd74P04441 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd74P04441 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd74P04441 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd74P04441 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd74P04441 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cd74P04441 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd74P04441 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd74P04441 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd74P04441 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd74P04441 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd74P04441 Gm12821-201ENSMUST00000120022 600 ntBASIC16.72■□□□□ 0.27
Cd74P04441 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.72■□□□□ 0.27
Cd74P04441 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.72■□□□□ 0.27
Cd74P04441 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.72■□□□□ 0.27
Cd74P04441 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd74P04441 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cd74P04441 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd74P04441 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd74P04441 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd74P04441 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd74P04441 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cd74P04441 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd74P04441 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cd74P04441 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd74P04441 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd74P04441 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd74P04441 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.71■□□□□ 0.27
Cd74P04441 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd74P04441 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Cd74P04441 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd74P04441 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd74P04441 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cd74P04441 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cd74P04441 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.7■□□□□ 0.26
Cd74P04441 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.7■□□□□ 0.26
Cd74P04441 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd74P04441 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.69■□□□□ 0.26
Cd74P04441 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.69■□□□□ 0.26
Cd74P04441 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.69■□□□□ 0.26
Cd74P04441 Golgb1-201ENSMUST00000023534 498 ntBASIC16.69■□□□□ 0.26
Cd74P04441 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.69■□□□□ 0.26
Cd74P04441 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cd74P04441 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Cd74P04441 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd74P04441 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd74P04441 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd74P04441 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd74P04441 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms