Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Colca2F8VPY8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Colca2F8VPY8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.44■□□□□ 0.7
Colca2F8VPY8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Colca2F8VPY8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.44■□□□□ 0.7
Colca2F8VPY8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.44■□□□□ 0.7
Colca2F8VPY8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Colca2F8VPY8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Colca2F8VPY8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Colca2F8VPY8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Colca2F8VPY8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Colca2F8VPY8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Colca2F8VPY8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Colca2F8VPY8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Colca2F8VPY8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Colca2F8VPY8 Gm27801-201ENSMUST00000184174 223 ntBASIC19.43■□□□□ 0.7
Colca2F8VPY8 Mir6236-201ENSMUST00000184437 123 ntBASIC19.43■□□□□ 0.7
Colca2F8VPY8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.43■□□□□ 0.7
Colca2F8VPY8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Colca2F8VPY8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.42■□□□□ 0.7
Colca2F8VPY8 Gm7514-201ENSMUST00000209475 934 ntBASIC19.42■□□□□ 0.7
Colca2F8VPY8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Colca2F8VPY8 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.42■□□□□ 0.7
Colca2F8VPY8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Colca2F8VPY8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Colca2F8VPY8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Colca2F8VPY8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Colca2F8VPY8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Colca2F8VPY8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Colca2F8VPY8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Colca2F8VPY8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.41■□□□□ 0.7
Colca2F8VPY8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Colca2F8VPY8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Colca2F8VPY8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Colca2F8VPY8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Colca2F8VPY8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Colca2F8VPY8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Colca2F8VPY8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Colca2F8VPY8 Gm10653-202ENSMUST00000139570 835 ntBASIC19.4■□□□□ 0.7
Colca2F8VPY8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Colca2F8VPY8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.4■□□□□ 0.7
Colca2F8VPY8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Colca2F8VPY8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Colca2F8VPY8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Colca2F8VPY8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Colca2F8VPY8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.39■□□□□ 0.7
Colca2F8VPY8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Colca2F8VPY8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Colca2F8VPY8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Colca2F8VPY8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Colca2F8VPY8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Colca2F8VPY8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Colca2F8VPY8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.39■□□□□ 0.69
Colca2F8VPY8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Colca2F8VPY8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Colca2F8VPY8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Colca2F8VPY8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Colca2F8VPY8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Colca2F8VPY8 Mir5133-201ENSMUST00000174955 77 ntBASIC19.38■□□□□ 0.69
Colca2F8VPY8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Colca2F8VPY8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Colca2F8VPY8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Colca2F8VPY8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Colca2F8VPY8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Colca2F8VPY8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Colca2F8VPY8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Colca2F8VPY8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Colca2F8VPY8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Colca2F8VPY8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Colca2F8VPY8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Colca2F8VPY8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Colca2F8VPY8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Colca2F8VPY8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Colca2F8VPY8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Colca2F8VPY8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.36■□□□□ 0.69
Colca2F8VPY8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Colca2F8VPY8 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.36■□□□□ 0.69
Colca2F8VPY8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Colca2F8VPY8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Colca2F8VPY8 Gm4968-201ENSMUST00000071458 858 ntBASIC19.36■□□□□ 0.69
Colca2F8VPY8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Colca2F8VPY8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Colca2F8VPY8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Colca2F8VPY8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.35■□□□□ 0.69
Colca2F8VPY8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Colca2F8VPY8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Colca2F8VPY8 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.35■□□□□ 0.69
Colca2F8VPY8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Colca2F8VPY8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.35■□□□□ 0.69
Colca2F8VPY8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.35■□□□□ 0.69
Colca2F8VPY8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Colca2F8VPY8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Colca2F8VPY8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Colca2F8VPY8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Colca2F8VPY8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.34■□□□□ 0.69
Colca2F8VPY8 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.34■□□□□ 0.69
Colca2F8VPY8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Colca2F8VPY8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Colca2F8VPY8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Colca2F8VPY8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms