Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx6-2D3Z4R4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx6-2D3Z4R4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Nkx6-2D3Z4R4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx6-2D3Z4R4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Gm45855-201ENSMUST00000212546 880 ntBASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-2D3Z4R4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx6-2D3Z4R4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx6-2D3Z4R4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx6-2D3Z4R4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx6-2D3Z4R4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx6-2D3Z4R4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-2D3Z4R4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-2D3Z4R4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nkx6-2D3Z4R4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.33■□□□□ 0.2
Nkx6-2D3Z4R4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-2D3Z4R4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
Nkx6-2D3Z4R4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-2D3Z4R4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.33■□□□□ 0.2
Nkx6-2D3Z4R4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-2D3Z4R4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-2D3Z4R4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-2D3Z4R4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-2D3Z4R4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-2D3Z4R4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Nkx6-2D3Z4R4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-2D3Z4R4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Nkx6-2D3Z4R4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-2D3Z4R4 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.31■□□□□ 0.2
Nkx6-2D3Z4R4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-2D3Z4R4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-2D3Z4R4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
Nkx6-2D3Z4R4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-2D3Z4R4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-2D3Z4R4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-2D3Z4R4 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.31■□□□□ 0.2
Nkx6-2D3Z4R4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-2D3Z4R4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-2D3Z4R4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-2D3Z4R4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-2D3Z4R4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-2D3Z4R4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx6-2D3Z4R4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx6-2D3Z4R4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx6-2D3Z4R4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx6-2D3Z4R4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx6-2D3Z4R4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx6-2D3Z4R4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Nkx6-2D3Z4R4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms