Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh20Q9Z0M3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh20Q9Z0M3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh20Q9Z0M3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh20Q9Z0M3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.71■□□□□ 0.59
Cdh20Q9Z0M3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cdh20Q9Z0M3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh20Q9Z0M3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.71■□□□□ 0.59
Cdh20Q9Z0M3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh20Q9Z0M3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh20Q9Z0M3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.71■□□□□ 0.59
Cdh20Q9Z0M3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh20Q9Z0M3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh20Q9Z0M3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh20Q9Z0M3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh20Q9Z0M3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Cdh20Q9Z0M3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh20Q9Z0M3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh20Q9Z0M3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh20Q9Z0M3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.69■□□□□ 0.58
Cdh20Q9Z0M3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh20Q9Z0M3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdh20Q9Z0M3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh20Q9Z0M3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh20Q9Z0M3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh20Q9Z0M3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh20Q9Z0M3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh20Q9Z0M3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh20Q9Z0M3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh20Q9Z0M3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh20Q9Z0M3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh20Q9Z0M3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh20Q9Z0M3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh20Q9Z0M3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh20Q9Z0M3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh20Q9Z0M3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.68■□□□□ 0.58
Cdh20Q9Z0M3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh20Q9Z0M3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh20Q9Z0M3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh20Q9Z0M3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh20Q9Z0M3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh20Q9Z0M3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdh20Q9Z0M3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh20Q9Z0M3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh20Q9Z0M3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh20Q9Z0M3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh20Q9Z0M3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh20Q9Z0M3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh20Q9Z0M3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh20Q9Z0M3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.66■□□□□ 0.58
Cdh20Q9Z0M3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.66■□□□□ 0.58
Cdh20Q9Z0M3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh20Q9Z0M3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 Gm9870-201ENSMUST00000063874 645 ntBASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh20Q9Z0M3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh20Q9Z0M3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh20Q9Z0M3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh20Q9Z0M3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh20Q9Z0M3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Cdh20Q9Z0M3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh20Q9Z0M3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh20Q9Z0M3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh20Q9Z0M3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh20Q9Z0M3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh20Q9Z0M3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
Cdh20Q9Z0M3 Gm45102-201ENSMUST00000207427 857 ntBASIC18.63■□□□□ 0.57
Cdh20Q9Z0M3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh20Q9Z0M3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh20Q9Z0M3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh20Q9Z0M3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cdh20Q9Z0M3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh20Q9Z0M3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh20Q9Z0M3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh20Q9Z0M3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh20Q9Z0M3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh20Q9Z0M3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh20Q9Z0M3 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.62■□□□□ 0.57
Cdh20Q9Z0M3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh20Q9Z0M3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh20Q9Z0M3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh20Q9Z0M3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.61■□□□□ 0.57
Cdh20Q9Z0M3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cdh20Q9Z0M3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.61■□□□□ 0.57
Cdh20Q9Z0M3 Rps24-207ENSMUST00000224568 714 ntBASIC18.61■□□□□ 0.57
Cdh20Q9Z0M3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh20Q9Z0M3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh20Q9Z0M3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh20Q9Z0M3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh20Q9Z0M3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms