Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Necab3Q9D6J4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Necab3Q9D6J4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
Necab3Q9D6J4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Necab3Q9D6J4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Necab3Q9D6J4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Necab3Q9D6J4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Necab3Q9D6J4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.59■□□□□ 0.89
Necab3Q9D6J4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Necab3Q9D6J4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.59■□□□□ 0.89
Necab3Q9D6J4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Necab3Q9D6J4 Smad6-203ENSMUST00000179458 273 ntBASIC20.59■□□□□ 0.89
Necab3Q9D6J4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.59■□□□□ 0.89
Necab3Q9D6J4 Gm40848-201ENSMUST00000221998 324 ntBASIC20.59■□□□□ 0.89
Necab3Q9D6J4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Necab3Q9D6J4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Necab3Q9D6J4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.58■□□□□ 0.89
Necab3Q9D6J4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Necab3Q9D6J4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Necab3Q9D6J4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Necab3Q9D6J4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Necab3Q9D6J4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.58■□□□□ 0.89
Necab3Q9D6J4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Necab3Q9D6J4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Necab3Q9D6J4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Necab3Q9D6J4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Necab3Q9D6J4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Necab3Q9D6J4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Necab3Q9D6J4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Necab3Q9D6J4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Necab3Q9D6J4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.57■□□□□ 0.88
Necab3Q9D6J4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Necab3Q9D6J4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Necab3Q9D6J4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Necab3Q9D6J4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Necab3Q9D6J4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Necab3Q9D6J4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.56■□□□□ 0.88
Necab3Q9D6J4 Gm10493-201ENSMUST00000097270 612 ntBASIC20.56■□□□□ 0.88
Necab3Q9D6J4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Necab3Q9D6J4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Necab3Q9D6J4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Necab3Q9D6J4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Necab3Q9D6J4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Necab3Q9D6J4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Necab3Q9D6J4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Necab3Q9D6J4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Necab3Q9D6J4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.55■□□□□ 0.88
Necab3Q9D6J4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Necab3Q9D6J4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Necab3Q9D6J4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.55■□□□□ 0.88
Necab3Q9D6J4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Necab3Q9D6J4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Necab3Q9D6J4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Necab3Q9D6J4 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.54■□□□□ 0.88
Necab3Q9D6J4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Necab3Q9D6J4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Necab3Q9D6J4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Necab3Q9D6J4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.53■□□□□ 0.88
Necab3Q9D6J4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Necab3Q9D6J4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Necab3Q9D6J4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.52■□□□□ 0.88
Necab3Q9D6J4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Necab3Q9D6J4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Necab3Q9D6J4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.52■□□□□ 0.88
Necab3Q9D6J4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.52■□□□□ 0.88
Necab3Q9D6J4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Necab3Q9D6J4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.52■□□□□ 0.88
Necab3Q9D6J4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Necab3Q9D6J4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Necab3Q9D6J4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Necab3Q9D6J4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.52■□□□□ 0.87
Necab3Q9D6J4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Necab3Q9D6J4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Necab3Q9D6J4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Necab3Q9D6J4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Necab3Q9D6J4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Necab3Q9D6J4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Necab3Q9D6J4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Necab3Q9D6J4 Mir6236-201ENSMUST00000184437 123 ntBASIC20.51■□□□□ 0.87
Necab3Q9D6J4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Necab3Q9D6J4 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.51■□□□□ 0.87
Necab3Q9D6J4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Necab3Q9D6J4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Necab3Q9D6J4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Necab3Q9D6J4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Necab3Q9D6J4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Necab3Q9D6J4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Necab3Q9D6J4 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.5■□□□□ 0.87
Necab3Q9D6J4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.5■□□□□ 0.87
Necab3Q9D6J4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Necab3Q9D6J4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Necab3Q9D6J4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.5■□□□□ 0.87
Necab3Q9D6J4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Necab3Q9D6J4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Necab3Q9D6J4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Necab3Q9D6J4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Necab3Q9D6J4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Necab3Q9D6J4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Necab3Q9D6J4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Necab3Q9D6J4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms