Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Gm10493-201ENSMUST00000097270 612 ntBASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Msantd3Q9CR78 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msantd3Q9CR78 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msantd3Q9CR78 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msantd3Q9CR78 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msantd3Q9CR78 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msantd3Q9CR78 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Msantd3Q9CR78 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.4■□□□□ 0.7
Msantd3Q9CR78 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msantd3Q9CR78 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msantd3Q9CR78 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Msantd3Q9CR78 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Msantd3Q9CR78 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Msantd3Q9CR78 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msantd3Q9CR78 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msantd3Q9CR78 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msantd3Q9CR78 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Msantd3Q9CR78 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Msantd3Q9CR78 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msantd3Q9CR78 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Msantd3Q9CR78 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.39■□□□□ 0.69
Msantd3Q9CR78 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msantd3Q9CR78 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msantd3Q9CR78 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msantd3Q9CR78 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msantd3Q9CR78 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msantd3Q9CR78 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Msantd3Q9CR78 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msantd3Q9CR78 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.36■□□□□ 0.69
Msantd3Q9CR78 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msantd3Q9CR78 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msantd3Q9CR78 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msantd3Q9CR78 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msantd3Q9CR78 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Msantd3Q9CR78 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.35■□□□□ 0.69
Msantd3Q9CR78 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Msantd3Q9CR78 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.35■□□□□ 0.69
Msantd3Q9CR78 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.35■□□□□ 0.69
Msantd3Q9CR78 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Msantd3Q9CR78 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.35■□□□□ 0.69
Msantd3Q9CR78 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Msantd3Q9CR78 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.35■□□□□ 0.69
Msantd3Q9CR78 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msantd3Q9CR78 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.34■□□□□ 0.69
Msantd3Q9CR78 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msantd3Q9CR78 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msantd3Q9CR78 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msantd3Q9CR78 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Msantd3Q9CR78 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Msantd3Q9CR78 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.34■□□□□ 0.69
Msantd3Q9CR78 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Msantd3Q9CR78 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msantd3Q9CR78 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msantd3Q9CR78 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Msantd3Q9CR78 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msantd3Q9CR78 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msantd3Q9CR78 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Msantd3Q9CR78 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msantd3Q9CR78 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msantd3Q9CR78 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msantd3Q9CR78 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Msantd3Q9CR78 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms