Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim33Q99PP7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim33Q99PP7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim33Q99PP7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
Trim33Q99PP7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim33Q99PP7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim33Q99PP7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim33Q99PP7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim33Q99PP7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.92■□□□□ 0.78
Trim33Q99PP7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim33Q99PP7 Gm9870-201ENSMUST00000063874 645 ntBASIC19.92■□□□□ 0.78
Trim33Q99PP7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim33Q99PP7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim33Q99PP7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim33Q99PP7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim33Q99PP7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim33Q99PP7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim33Q99PP7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.91■□□□□ 0.78
Trim33Q99PP7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim33Q99PP7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.91■□□□□ 0.78
Trim33Q99PP7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim33Q99PP7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Trim33Q99PP7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim33Q99PP7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim33Q99PP7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim33Q99PP7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim33Q99PP7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim33Q99PP7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim33Q99PP7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.9■□□□□ 0.78
Trim33Q99PP7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim33Q99PP7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim33Q99PP7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim33Q99PP7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim33Q99PP7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim33Q99PP7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.89■□□□□ 0.77
Trim33Q99PP7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim33Q99PP7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim33Q99PP7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim33Q99PP7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.88■□□□□ 0.77
Trim33Q99PP7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim33Q99PP7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim33Q99PP7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim33Q99PP7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim33Q99PP7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim33Q99PP7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim33Q99PP7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim33Q99PP7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim33Q99PP7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim33Q99PP7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim33Q99PP7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim33Q99PP7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim33Q99PP7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim33Q99PP7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trim33Q99PP7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim33Q99PP7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim33Q99PP7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim33Q99PP7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim33Q99PP7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim33Q99PP7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim33Q99PP7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim33Q99PP7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim33Q99PP7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim33Q99PP7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim33Q99PP7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim33Q99PP7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim33Q99PP7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim33Q99PP7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim33Q99PP7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
Trim33Q99PP7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim33Q99PP7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim33Q99PP7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim33Q99PP7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim33Q99PP7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim33Q99PP7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.85■□□□□ 0.77
Trim33Q99PP7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim33Q99PP7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim33Q99PP7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim33Q99PP7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim33Q99PP7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim33Q99PP7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim33Q99PP7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim33Q99PP7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim33Q99PP7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim33Q99PP7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim33Q99PP7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim33Q99PP7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim33Q99PP7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms