Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Abca8bQ8K440 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
Abca8bQ8K440 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Abca8bQ8K440 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC30.69■■■□□ 2.5
Abca8bQ8K440 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
Abca8bQ8K440 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Abca8bQ8K440 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
Abca8bQ8K440 Gm12441-201ENSMUST00000121806 588 ntBASIC30.68■■■□□ 2.5
Abca8bQ8K440 AC153890.1-201ENSMUST00000220021 2469 ntBASIC30.68■■■□□ 2.5
Abca8bQ8K440 Reep4-203ENSMUST00000226563 1444 ntBASIC30.68■■■□□ 2.5
Abca8bQ8K440 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Abca8bQ8K440 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Abca8bQ8K440 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Abca8bQ8K440 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Abca8bQ8K440 AC137127.1-201ENSMUST00000213466 1078 ntBASIC30.66■■■□□ 2.5
Abca8bQ8K440 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Abca8bQ8K440 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Abca8bQ8K440 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Abca8bQ8K440 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Abca8bQ8K440 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC30.65■■■□□ 2.5
Abca8bQ8K440 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Abca8bQ8K440 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC30.65■■■□□ 2.5
Abca8bQ8K440 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Abca8bQ8K440 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Abca8bQ8K440 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Abca8bQ8K440 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Abca8bQ8K440 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Abca8bQ8K440 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Abca8bQ8K440 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Abca8bQ8K440 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Abca8bQ8K440 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Abca8bQ8K440 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Abca8bQ8K440 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Abca8bQ8K440 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Abca8bQ8K440 AC164883.3-201ENSMUST00000227396 1774 ntBASIC30.63■■■□□ 2.49
Abca8bQ8K440 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Abca8bQ8K440 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
Abca8bQ8K440 Gm27801-201ENSMUST00000184174 223 ntBASIC30.62■■■□□ 2.49
Abca8bQ8K440 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Abca8bQ8K440 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Abca8bQ8K440 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Abca8bQ8K440 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Abca8bQ8K440 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Abca8bQ8K440 Gm9988-201ENSMUST00000069786 435 ntBASIC30.62■■■□□ 2.49
Abca8bQ8K440 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
Abca8bQ8K440 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Abca8bQ8K440 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Abca8bQ8K440 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC30.61■■■□□ 2.49
Abca8bQ8K440 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
Abca8bQ8K440 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC30.6■■■□□ 2.49
Abca8bQ8K440 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
Abca8bQ8K440 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Abca8bQ8K440 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC30.59■■■□□ 2.49
Abca8bQ8K440 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Abca8bQ8K440 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Abca8bQ8K440 Gm44949-201ENSMUST00000206423 1450 ntBASIC30.59■■■□□ 2.49
Abca8bQ8K440 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Abca8bQ8K440 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC30.58■■■□□ 2.49
Abca8bQ8K440 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC30.58■■■□□ 2.49
Abca8bQ8K440 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC30.58■■■□□ 2.49
Abca8bQ8K440 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Abca8bQ8K440 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Abca8bQ8K440 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Abca8bQ8K440 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Abca8bQ8K440 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Abca8bQ8K440 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Abca8bQ8K440 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Abca8bQ8K440 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Abca8bQ8K440 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Abca8bQ8K440 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Abca8bQ8K440 Gm42418-201ENSMUST00000182010 1831 ntBASIC30.57■■■□□ 2.48
Abca8bQ8K440 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Abca8bQ8K440 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Abca8bQ8K440 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Abca8bQ8K440 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Abca8bQ8K440 Gm4968-201ENSMUST00000071458 858 ntBASIC30.56■■■□□ 2.48
Abca8bQ8K440 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Abca8bQ8K440 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Abca8bQ8K440 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Abca8bQ8K440 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
Abca8bQ8K440 Gm42555-201ENSMUST00000199304 1039 ntBASIC30.55■■■□□ 2.48
Abca8bQ8K440 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC30.55■■■□□ 2.48
Abca8bQ8K440 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC30.55■■■□□ 2.48
Abca8bQ8K440 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
Abca8bQ8K440 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Abca8bQ8K440 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Abca8bQ8K440 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Abca8bQ8K440 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Abca8bQ8K440 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Abca8bQ8K440 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Abca8bQ8K440 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Abca8bQ8K440 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Abca8bQ8K440 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC30.54■■■□□ 2.48
Abca8bQ8K440 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC30.54■■■□□ 2.48
Abca8bQ8K440 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC30.54■■■□□ 2.48
Abca8bQ8K440 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Abca8bQ8K440 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Abca8bQ8K440 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Abca8bQ8K440 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Abca8bQ8K440 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms