Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38bQ80SY5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38bQ80SY5 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.04■□□□□ 0.96
Prpf38bQ80SY5 Gm42642-201ENSMUST00000200683 355 ntBASIC21.04■□□□□ 0.96
Prpf38bQ80SY5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38bQ80SY5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Prpf38bQ80SY5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.04■□□□□ 0.96
Prpf38bQ80SY5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38bQ80SY5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Prpf38bQ80SY5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38bQ80SY5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38bQ80SY5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38bQ80SY5 Gm43173-201ENSMUST00000202246 593 ntBASIC21.03■□□□□ 0.96
Prpf38bQ80SY5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38bQ80SY5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38bQ80SY5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38bQ80SY5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38bQ80SY5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38bQ80SY5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Prpf38bQ80SY5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38bQ80SY5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38bQ80SY5 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.02■□□□□ 0.96
Prpf38bQ80SY5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.02■□□□□ 0.96
Prpf38bQ80SY5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Prpf38bQ80SY5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Prpf38bQ80SY5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38bQ80SY5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Gm9870-201ENSMUST00000063874 645 ntBASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prpf38bQ80SY5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf38bQ80SY5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prpf38bQ80SY5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Prpf38bQ80SY5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21■□□□□ 0.95
Prpf38bQ80SY5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21■□□□□ 0.95
Prpf38bQ80SY5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prpf38bQ80SY5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prpf38bQ80SY5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21■□□□□ 0.95
Prpf38bQ80SY5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21■□□□□ 0.95
Prpf38bQ80SY5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38bQ80SY5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38bQ80SY5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38bQ80SY5 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.99■□□□□ 0.95
Prpf38bQ80SY5 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.99■□□□□ 0.95
Prpf38bQ80SY5 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.99■□□□□ 0.95
Prpf38bQ80SY5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Prpf38bQ80SY5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38bQ80SY5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prpf38bQ80SY5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prpf38bQ80SY5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38bQ80SY5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38bQ80SY5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.97■□□□□ 0.95
Prpf38bQ80SY5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38bQ80SY5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.97■□□□□ 0.95
Prpf38bQ80SY5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Prpf38bQ80SY5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38bQ80SY5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prpf38bQ80SY5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Prpf38bQ80SY5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.97■□□□□ 0.95
Prpf38bQ80SY5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.96■□□□□ 0.95
Prpf38bQ80SY5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Prpf38bQ80SY5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38bQ80SY5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38bQ80SY5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38bQ80SY5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38bQ80SY5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38bQ80SY5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38bQ80SY5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms