Protein–RNA interactions for Protein: Q33DR2

Pdss1, Decaprenyl-diphosphate synthase subunit 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdss1Q33DR2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdss1Q33DR2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdss1Q33DR2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdss1Q33DR2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.57■□□□□ 0.88
Pdss1Q33DR2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
Pdss1Q33DR2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdss1Q33DR2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdss1Q33DR2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdss1Q33DR2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.56■□□□□ 0.88
Pdss1Q33DR2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdss1Q33DR2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdss1Q33DR2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdss1Q33DR2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdss1Q33DR2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdss1Q33DR2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdss1Q33DR2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pdss1Q33DR2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdss1Q33DR2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.55■□□□□ 0.88
Pdss1Q33DR2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pdss1Q33DR2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pdss1Q33DR2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.55■□□□□ 0.88
Pdss1Q33DR2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pdss1Q33DR2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdss1Q33DR2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdss1Q33DR2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdss1Q33DR2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdss1Q33DR2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdss1Q33DR2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdss1Q33DR2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.54■□□□□ 0.88
Pdss1Q33DR2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pdss1Q33DR2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdss1Q33DR2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Pdss1Q33DR2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdss1Q33DR2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pdss1Q33DR2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.53■□□□□ 0.88
Pdss1Q33DR2 Gm7143-201ENSMUST00000222811 859 ntBASIC20.53■□□□□ 0.88
Pdss1Q33DR2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pdss1Q33DR2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pdss1Q33DR2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdss1Q33DR2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdss1Q33DR2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdss1Q33DR2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdss1Q33DR2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.52■□□□□ 0.88
Pdss1Q33DR2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pdss1Q33DR2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pdss1Q33DR2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.52■□□□□ 0.87
Pdss1Q33DR2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pdss1Q33DR2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Pdss1Q33DR2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pdss1Q33DR2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pdss1Q33DR2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.51■□□□□ 0.87
Pdss1Q33DR2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdss1Q33DR2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.51■□□□□ 0.87
Pdss1Q33DR2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdss1Q33DR2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Gm15820-201ENSMUST00000201566 728 ntBASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdss1Q33DR2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pdss1Q33DR2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pdss1Q33DR2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdss1Q33DR2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdss1Q33DR2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdss1Q33DR2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdss1Q33DR2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdss1Q33DR2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.48■□□□□ 0.87
Pdss1Q33DR2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pdss1Q33DR2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.48■□□□□ 0.87
Pdss1Q33DR2 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.48■□□□□ 0.87
Pdss1Q33DR2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pdss1Q33DR2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pdss1Q33DR2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pdss1Q33DR2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pdss1Q33DR2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pdss1Q33DR2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdss1Q33DR2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdss1Q33DR2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdss1Q33DR2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.47■□□□□ 0.87
Pdss1Q33DR2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pdss1Q33DR2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdss1Q33DR2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdss1Q33DR2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdss1Q33DR2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pdss1Q33DR2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pdss1Q33DR2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdss1Q33DR2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdss1Q33DR2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdss1Q33DR2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdss1Q33DR2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdss1Q33DR2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms