Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd3P97770 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd3P97770 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd3P97770 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Thumpd3P97770 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd3P97770 Gm15039-201ENSMUST00000118914 875 ntBASIC20.45■□□□□ 0.86
Thumpd3P97770 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd3P97770 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Thumpd3P97770 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd3P97770 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd3P97770 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd3P97770 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Thumpd3P97770 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Thumpd3P97770 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd3P97770 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Thumpd3P97770 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Thumpd3P97770 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd3P97770 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.44■□□□□ 0.86
Thumpd3P97770 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd3P97770 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd3P97770 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd3P97770 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Thumpd3P97770 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd3P97770 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Thumpd3P97770 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd3P97770 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Thumpd3P97770 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd3P97770 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.43■□□□□ 0.86
Thumpd3P97770 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd3P97770 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.43■□□□□ 0.86
Thumpd3P97770 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd3P97770 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.43■□□□□ 0.86
Thumpd3P97770 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd3P97770 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd3P97770 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Thumpd3P97770 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Thumpd3P97770 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Thumpd3P97770 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Thumpd3P97770 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd3P97770 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd3P97770 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd3P97770 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.42■□□□□ 0.86
Thumpd3P97770 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.42■□□□□ 0.86
Thumpd3P97770 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd3P97770 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd3P97770 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Thumpd3P97770 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Thumpd3P97770 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Thumpd3P97770 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.41■□□□□ 0.86
Thumpd3P97770 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Thumpd3P97770 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.41■□□□□ 0.86
Thumpd3P97770 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Thumpd3P97770 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.41■□□□□ 0.86
Thumpd3P97770 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.41■□□□□ 0.86
Thumpd3P97770 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd3P97770 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd3P97770 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd3P97770 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Thumpd3P97770 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd3P97770 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.4■□□□□ 0.86
Thumpd3P97770 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd3P97770 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd3P97770 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd3P97770 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd3P97770 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd3P97770 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd3P97770 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Thumpd3P97770 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Thumpd3P97770 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Thumpd3P97770 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd3P97770 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.39■□□□□ 0.85
Thumpd3P97770 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Thumpd3P97770 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd3P97770 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd3P97770 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.39■□□□□ 0.85
Thumpd3P97770 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd3P97770 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd3P97770 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd3P97770 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Thumpd3P97770 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd3P97770 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Thumpd3P97770 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.38■□□□□ 0.85
Thumpd3P97770 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.38■□□□□ 0.85
Thumpd3P97770 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Thumpd3P97770 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd3P97770 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd3P97770 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd3P97770 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd3P97770 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd3P97770 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Thumpd3P97770 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thumpd3P97770 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.37■□□□□ 0.85
Thumpd3P97770 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thumpd3P97770 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.37■□□□□ 0.85
Thumpd3P97770 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Thumpd3P97770 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thumpd3P97770 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thumpd3P97770 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thumpd3P97770 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thumpd3P97770 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms