Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx3-2P97503 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx3-2P97503 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.03■□□□□ 0.64
Nkx3-2P97503 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx3-2P97503 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx3-2P97503 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nkx3-2P97503 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx3-2P97503 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx3-2P97503 Iqck-206ENSMUST00000208658 2891 ntBASIC19.03■□□□□ 0.64
Nkx3-2P97503 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.02■□□□□ 0.64
Nkx3-2P97503 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.02■□□□□ 0.64
Nkx3-2P97503 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx3-2P97503 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx3-2P97503 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.01■□□□□ 0.63
Nkx3-2P97503 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx3-2P97503 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Nkx3-2P97503 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.01■□□□□ 0.63
Nkx3-2P97503 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Nkx3-2P97503 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx3-2P97503 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx3-2P97503 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19■□□□□ 0.63
Nkx3-2P97503 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Nkx3-2P97503 Serp2-204ENSMUST00000228055 705 ntBASIC19■□□□□ 0.63
Nkx3-2P97503 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx3-2P97503 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx3-2P97503 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx3-2P97503 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nkx3-2P97503 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx3-2P97503 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx3-2P97503 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nkx3-2P97503 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx3-2P97503 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx3-2P97503 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx3-2P97503 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx3-2P97503 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx3-2P97503 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx3-2P97503 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx3-2P97503 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx3-2P97503 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.98■□□□□ 0.63
Nkx3-2P97503 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.98■□□□□ 0.63
Nkx3-2P97503 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx3-2P97503 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx3-2P97503 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Gm43530-201ENSMUST00000195920 274 ntBASIC18.97■□□□□ 0.63
Nkx3-2P97503 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.97■□□□□ 0.63
Nkx3-2P97503 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx3-2P97503 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx3-2P97503 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx3-2P97503 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx3-2P97503 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Nkx3-2P97503 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nkx3-2P97503 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx3-2P97503 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx3-2P97503 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx3-2P97503 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Nkx3-2P97503 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx3-2P97503 Gm43137-201ENSMUST00000198052 594 ntBASIC18.94■□□□□ 0.62
Nkx3-2P97503 Gm6139-201ENSMUST00000079261 882 ntBASIC18.94■□□□□ 0.62
Nkx3-2P97503 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx3-2P97503 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx3-2P97503 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx3-2P97503 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx3-2P97503 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms